Job Description P60340 Confidence 97.27% Date Thu Jan 5 12:06:43 GMT 2012 Rank 27 Aligned Residues 70 % Identity 23% Template c1v9fA_ PDB info PDB header:lyase Chain: A: PDB Molecule:ribosomal large subunit pseudouridine synthase d; PDBTitle: crystal structure of catalytic domain of pseudouridine2 synthase rlud from escherichia coli Resolution 1.70 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.									.	.	.	30	.	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.			.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.											.	.	.	.																												.	.											.	.
Query SS confidence																	.	.	.	.	.	.	.	.											.	.	.	.																												.	.											.	.
Query Sequence		N	G	V	L	L	L	D	K	P	Q	G	M	S	S	N	.	.	.	.	.	.	.	.	D	A	L	Q	K	V	K	R	I	Y	.	.	.	.	N	A	N	R	A	G	H	T	G	A	L	D	P	L	A	T	G	M	L	P	I	C	L	G	E	A	T	.	.	K	F	S	Q	Y	L	L	D	S	D	.	.	K	R
Query Conservation																	.	.	.	.	.	.	.	.											.	.	.	.																												.	.											.	.
Alig confidence																	.	.	.	.	.	.	.	.											.	.	.	.																												.	.											.	.
Template Conservation
Template Sequence		E	D	I	I	I	I	N	K	P	R	D	L	V	V	H	P	G	A	G	N	P	D	G	T	V	L	N	A	L	L	H	Y	Y	P	P	I	A	D	V	P	R	A	G	I	V	H	R	L	D	K	D	T	T	G	L	M	V	V	A	K	T	V	P	A	Q	T	R	L	V	E	S	L	Q	R	R	E	I	T	R	E
Template Known Secondary structure		S	S								S	S			S	S		B	T	T	B	S	S	S	S										G	G	G	G	G	S	G	G	G	G	B						T	T									S	S													T	T		S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		76	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	V	I	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	E	A	V	A	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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