Job Description P60340 Confidence 67.73% Date Thu Jan 5 12:06:43 GMT 2012 Rank 36 Aligned Residues 101 % Identity 12% Template c1sb7A_ PDB info PDB header:lyase Chain: A: PDB Molecule:trna pseudouridine synthase d; PDBTitle: crystal structure of the e.coli pseudouridine synthase trud Resolution 2.20 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.				.	.	.
Predicted Secondary structure																											.	.																																																.	.	.
Query SS confidence																											.	.																																																.	.	.
Query Sequence		V	L	L	L	D	K	P	Q	G	M	S	S	N	D	A	L	Q	K	V	K	R	I	Y	N	A	.	.	N	R	A	G	H	T	G	A	L	D	P	L	A	T	G	M	L	P	I	C	L	G	E	A	T	K	F	S	Q	Y	L	L	D	S	D	K	R	Y	R	V	I	A	R	L	G	Q	R	.	.	.	T	D	T
Query Conservation																											.	.																																																.	.	.
Alig confidence									.																		.	.																																																.	.	.
Template Conservation									.
Template Sequence		L	V	R	I	L	K	N	.	G	C	N	T	R	F	V	A	D	A	L	A	K	F	L	K	I	H	A	R	E	V	S	F	A	G	Q	K	D	K	H	A	V	T	E	Q	W	L	C	A	R	V	P	G	K	E	X	P	D	L	S	A	F	Q	L	E	G	C	Q	V	L	E	Y	A	R	H	K	R	K	L	R	L
Template Known Secondary structure									.	S	S													T	T	S		G	G	G				S					T	T	S												S	S					T	T	S				T	T										S	S				T
Template Predicted Secondary structure									.
Template SS confidence
		45	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		S	D	A	D	G	Q	I	V	E	E	R	P	V	T	.	F	S	A	E	Q	L	A	A	A	L	D	T	F
Query Conservation																.
Alig confidence																.
Template Conservation
Template Sequence		G	A	L	K	G	N	A	F	T	L	V	L	R	E	V	S	N	R	D	D	V	E	Q	R	L	I	D	I
Template Known Secondary structure		T													S		S
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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