 |
Job Description | P36677 | Confidence | 4.77% | Date | Thu Jan 5 11:53:41 GMT 2012 |
Rank | 76 | Aligned Residues | 88 |
% Identity | 11% | Template | c3q3hA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:hmw1c-like glycosyltransferase; |
PDBTitle: crystal structure of the actinobacillus pleuropneumoniae hmw1c2 glycosyltransferase in complex with udp-glc
|
Resolution | 2.25 Å |
|
 |
  |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | I | L | D | D | D | S | H | V | P | P | E | L | R | A | G | Y | R | L | L | K | N | A | G | C | L | P | P | E | . |
L | E | Q | R | R | E | A | I | Q | L | L | D | I | L | K | G | I | R | H | D | D | P | Q | Y | Q | E | V | S | R | R | L | S | L | L | E | L | K | L | R | Q | A | G | L | S | T | D | F | L | R | G |
Query Conservation |   |
|   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|
|
|
|
|   |   |
|   |   | . |
|
|
|   |
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . |
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |
|   |   |   |   |
|
|   |   |
|
|
|
|   |   |   |
| . |
|   |
|   |
|
|
| . | . |   |
|   |
|
|
|
|   |   |
|
|   |
|
|   |
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | V | G | V | C | K | T | G | A | E | V | H | E | H | I | D | E | G | L | F | K | R | L | G | . |
L | P | E | W | L | I | A | . |
. |
N | T | V | D | E | Y | V | E | R | A | V | R | L | A | E | N | H | Q | E | R | L | E | L | R | R | Y | I | I | E | N | N | G | L | N | T | L | F | T | G | D | P | R | P | M | G | Q |
Template Known Secondary structure |   |
|
|  |  |  |  |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . |
|
| G | G | G |  |  | . | . | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  | S |
| T |  |  |  |  |  |
| S |
|
| T |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|
|
|  |  | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
531 | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | |
. | . | . | . | . | 560 | . | |
|
. | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . |
  |
  |   |
110 | . | . | . | . | . | . | . | . | . | 120 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | Y | A | D | K | L | L | D | K | I | N | D |
Query Conservation |   |
  |
|   |   |
|
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | F | L | E | K | L | N | A | F | L | K | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
608 | . | 610 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|