Return to main results Retrieve Phyre Job Id

Job DescriptionP75800
Confidence58.24%DateThu Jan 5 12:14:19 GMT 2012
Rank237Aligned Residues63
% Identity29%Templated2fhfa5
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   680.........690... ......700..
Predicted Secondary structure 





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Query Sequence  VRISIDDFGTGLSN. . . . . . . . . . . . . . . . . . . . . . LKRFYEINP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  HESHIRDLSAWDQTVPAELRGKYLALTAQESNMVQHLKQLSASGVTHIELLPVFDLATVNEFSDKVADIQQPFSRLCEVN
Template Known Secondary structure 
TT
TTS
GGGTTSGGGGG
TTST

S

SSS


GGG


TTSB
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   427..430.........440.........450.........460.........470.........480.........490.........500......
 
   703......710.........720 .....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DSIKVDSQFTGDIFGTAG. KIVRI
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Template Sequence  SAVKSSEFAGYCDSGSTVEEVLTQLKQNDSKDNPQVQALNTLVAQTDSYNWGYDPFHYTVPEGSYATDPEGTARIKEFRT
Template Known Secondary structure  TSTTGGGTTSS
BSTT
BTTB
TTSSS






STTSS

STT
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   507..510.........520.........530.........540.........550.........560.........570.........580......
 
   726...730.. .......740..
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Query Sequence  IFDLARY. NRIPVIAEGV
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Template Sequence  MIQAIKQDLGMNVIMDVV
Template Known Secondary structure  TS


Template Predicted Secondary structure 


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   587..590.........600....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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