 |
Job Description | P75800 | Confidence | 54.41% | Date | Thu Jan 5 12:14:19 GMT 2012 |
Rank | 251 | Aligned Residues | 92 |
% Identity | 12% | Template | d1tqja_ |
SCOP info | TIM beta/alpha-barrel
| Ribulose-phoshate binding barrel
| D-ribulose-5-phosphate 3-epimerase
|
Resolution | 1.60 |
|
 |
  |   |
666 | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | |
|
. | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | |
|
. | . | . | . | . | . | . | 740 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | H | F | Y | L | N | I | E | Q | L | R | K | Q | G | V | R | I | S | I | D | D | F | G | T | G | L | S | N | L | K | R | F | Y | E | I | . |
. |
N | P | D | S | I | K | V | D | S | Q | F | T | G | D | I | F | G | T | A | G | K | I | V | R | I | I | F | D | L | A | R | Y | . |
. |
N | R | I | P | V | I | A | E | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|
|
|
|   |
|   |
|
|
|   |   |
|   |   |   | . | . |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   | . | . |   |   |   |   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
Template Sequence |   |
P | H | L | H | R | T | L | C | Q | I | R | E | L | G | K | K | A | G | A | V | . |
. |
L | N | P | S | T | P | L | D | F | L | E | Y | V | L | P | V | C | D | L | I | L | I | M | S | V | N | P | Q | S | F | I | P | E | V | L | P | K | I | R | A | L | R | Q | M | C | D | E | R | G | L | D | P | W | I | E | V | D | G |
Template Known Secondary structure |   |
T | T |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  | . | . |  |
| T | T |
|
| G | G | G | G | T | T | T | G | G | G |
| S |  |  |  |  |  | S | S |
|
|
|
|
|
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|  |  |  |  |  | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
| . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | |
|
. | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . |
  |
  |   |
742 | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | E | S | E | D | V | A | R | E | L | I | K | L | G | C | V | Q | A |
Query Conservation |   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |
|   |   |   |   |   |   |
|
|
|   |
|
Template Sequence |   |
G | L | K | P | N | N | T | W | Q | V | L | E | A | G | A | N | A | I |
Template Known Secondary structure |   |
S |
|
| T | T | T | T |  |  |  |  |  |  | T |
|
|  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
181 | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|