 |
Job Description | P75800 | Confidence | 70.43% | Date | Thu Jan 5 12:14:19 GMT 2012 |
Rank | 185 | Aligned Residues | 64 |
% Identity | 20% | Template | d1m7xa3 |
SCOP info | TIM beta/alpha-barrel
| (Trans)glycosidases
| Amylase, catalytic domain
|
Resolution | 2.30 |
|
 |
  |   |
665 | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | |
690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  | . | . | . | . | . | . | . |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | E | H | F | Y | L | N | I | E | Q | L | R | K | Q | G | V | R | I | . |
. |
. |
. |
. |
. |
. |
S | I | D | D | F | G | T | . |
G | L | S | N | L | K | R | F | Y | E | I | N | P | D | S | I | K | V | D | S | Q | F | T | G | D | I | F | G | T | A | G | K | I | V | R | I | I | F | D | L | A | R | Y | N | R | I | P |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   | . | . | . | . | . | . | . |   |
|
|
|
|
|   | . |
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
| . |
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
|
|
|   |   |
|
|
|   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |
|
|   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|
|
|   |   |
|
| . | . | . | . | . | . |   |   |
|
|
|   |
|
|   |   |
|
|   |   |
|
|   |
Template Sequence |   |
R | E | L | A | D | Q | L | V | P | Y | A | K | W | M | G | F | T | H | L | E | L | L | P | I | N | E | H | P | F | D | G | S | W | G | Y | Q | . |
. |
. |
. |
. |
. |
. |
. |
P | T | G | L | Y | A | P | T | R | R | F | G | T | . |
. |
. |
. |
. |
. |
R | D | D | F | R | Y | F | I | D | A | A | H | A | A | G | L | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  | S |
|
|  |  |
| S |
| G | G | G | T | T | S | S | . | . | . | . | . | . | . | . |
| S |  |  |  |  |  |
| G | G | G | S |
| . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
266 | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 310 | . | . | . | . | |
|
|
|
|
|
. | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . |
  |
  |   |
737 | . | . | 740 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
V | I | A | E | G | V |
Query Conservation |   |
  |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|
Template Sequence |   |
V | I | L | D | W | V |
Template Known Secondary structure |   |
 |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
  |   |
332 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|