 |
Job Description | P75800 | Confidence | 73.21% | Date | Thu Jan 5 12:14:19 GMT 2012 |
Rank | 168 | Aligned Residues | 106 |
% Identity | 15% | Template | c3t6kB_ |
PDB info |
PDB header:signaling protein | Chain: B: PDB Molecule:response regulator receiver; |
PDBTitle: crystal structure of a hypothetical response regulator (caur_3799)2 from chloroflexus aurantiacus j-10-fl at 1.86 a resolution
|
Resolution | 1.86 Å |
|
 |
  |   |
663 | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | |
. | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | |
. | 740 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
Query Sequence |   |
R | I | N | E | H | F | Y | L | N | I | E | Q | L | R | K | Q | G | V | R | I | S | I | D | D | F | G | T | G | L | S | N | L | K | R | F | Y | E | I | N | P | D | S | I | K | V | D | S | Q | F | T | G | D | I | F | G | T | A | G | . |
K | I | V | R | I | I | F | D | L | A | R | Y | N | R | I | P | V | I | . |
A | E |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|
|
|
|   |
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
| . |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   | . | . |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
| . | . | . | . |   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|
Template Sequence |   |
D | D | D | T | V | A | E | X | L | E | L | V | L | R | G | A | G | Y | E | . |
. |
V | R | R | A | A | S | G | E | E | A | L | Q | Q | I | Y | K | N | L | P | D | A | L | I | C | D | . |
. |
. |
. |
V | L | L | P | G | I | D | G | Y | T | L | C | K | R | V | R | Q | H | P | L | T | K | T | L | P | I | L | X | L | T |
Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  | . | . |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  | S |
|
| S |  |  |  |  |  | . | . | . | . | S |
|
| S | S | S |
|  |  |  |  |  |  |  |  |  |  | S | G | G | G | T | T |
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
| . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | |
|
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | |
|
|
|
. | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
  |
  |   |
741 | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | V | E | S | E | D | V | A | R | E | L | I | K | L | G | C | V | Q | A | Q | G | Y | L | Y | Q | K | P | M | P | F | S | A | W | D | K | S | G | K |
Query Conservation |   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   | . | . | . | . |   |   |
|   |
|
|   |   |   |   |   |
|   |   |   |
|   |
Template Sequence |   |
A | Q | G | D | I | S | A | K | I | A | G | F | E | A | G | A | N | . |
. |
. |
. |
D | Y | L | A | K | P | F | E | P | Q | E | L | V | Y | R | V | K |
Template Known Secondary structure |   |
| T | T |
|  |  |  |  |  |  |  |  |  |  | T |
| S | . | . | . | . |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | |
|
|
|
. | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|