Job Description P75800 Confidence 22.36% Date Thu Jan 5 12:14:19 GMT 2012 Rank 382 Aligned Residues 227 % Identity 22% Template c3nzqB_ PDB info PDB header:lyase Chain: B: PDB Molecule:biosynthetic arginine decarboxylase; PDBTitle: crystal structure of biosynthetic arginine decarboxylase adc (spea)2 from escherichia coli, northeast structural genomics consortium3 target er600 Resolution 3.10 Å

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		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.														.	.	.	.	.	560	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Query Sequence		K	L	A	I	S	S	I	R	D	H	M	F	S	E	F	I	F	C	D	D	A	K	L	N	E	I	E	E	N	I	W	I	A	R	N	I	R	H	A	M	E	I	G	E	L	F	L	V	Y	Q	P	I	V	D	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	A	I	L	G	A	E	A	.	.
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Alig confidence																																	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Conservation																																	.	.
Template Sequence		Q	L	V	K	T	R	E	A	Q	G	Q	R	L	P	A	L	F	C	F	P	Q	I	L	Q	H	R	L	R	S	I	N	.	.	A	A	F	K	R	A	R	E	S	Y	G	Y	N	G	D	Y	F	L	V	Y	P	I	K	V	N	Q	H	R	R	V	I	E	S	L	I	H	S	G	E	P	L	G	L	E	A	G	S
Template Known Secondary structure										T	T			S	S																		.	.											T			S								G	G	G												T	S	S	S							S	S
Template Predicted Secondary structure																																	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
									564	.	.	.	.	.	570	.	.	.	.	.					.	.	.	.	580	.	.	.	.	.				.	.	.	.			590	.	.	.	.		.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.													.	.	.	.											.	.	.					.	.						.																															.	.
Query SS confidence		.	.	.	.	.	.	.													.	.	.	.											.	.	.					.	.						.																															.	.
Query Sequence		.	.	.	.	.	.	.	L	C	R	W	V	S	A	E	R	G	I	I	.	.	.	.	S	P	L	K	F	I	T	I	A	E	.	.	.	D	I	G	F	.	.	I	N	E	L	G	.	Y	Q	I	I	K	T	A	M	G	E	F	R	H	F	S	Q	R	A	S	L	K	D	D	F	L	L	H	I	N	V	.	.
Query Conservation		.	.	.	.	.	.	.													.	.	.	.											.	.	.					.	.						.																															.	.
Alig confidence		.	.	.	.	.	.	.													.	.	.	.											.	.	.					.	.						.																		.	.	.	.										.	.
Template Conservation																																																																			.	.	.	.
Template Sequence		K	A	E	L	M	A	V	L	A	H	A	G	M	T	R	S	V	I	V	C	N	G	Y	K	D	R	E	Y	I	R	L	A	L	I	G	E	K	M	G	H	K	V	Y	L	V	I	E	K	M	S	E	I	A	I	V	L	D	E	A	E	R	L	N	V	V	.	.	.	.	P	R	L	G	V	R	A	R	L	A	S
Template Known Secondary structure													T	T	S								S																T	T									S														T	T			.	.	.	.							B			S	S
Template Predicted Secondary structure																																																																			.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.					.	.	.	220	.	.	.	.	.	.	.
															625	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.		.	650	.	.	.	.	.	.						.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																									.									.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																									.									.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	W	Q	L	N	E	P	H	F	H	E	R	F	T	T	I	M	K	E	N	G	L	K	.	A	N	S	L	C	V	E	I	.	.	.	.	.	T	E	T	V	I	E	R	I	N	E	H	F	Y	L	N	I	E	Q	L	R	K	Q	G	V	R	I	S	I	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																									.									.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																									.									.	.	.	.	.
Template Conservation
Template Sequence		Q	G	S	G	K	W	Q	S	S	G	G	E	K	S	K	F	G	L	A	A	T	Q	V	L	Q	L	V	E	T	L	R	E	A	G	R	L	D	S	L	Q	L	L	H	F	H	L	G	S	Q	M	A	N	I	R	D	I	A	T	G	V	R	E	S	A	R	F	Y	V	E	L	H	K	L	G	V	N	I	Q	C	F
Template Known Secondary structure		S		S	S	T	T		S	S	S	S	S				S		B															T	T		T	T	T										S	S																							T	T	T
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		686	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.					.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.				.	.	.	740
Predicted Secondary structure																																			.	.	.	.																			.	.	.
Query SS confidence																																			.	.	.	.																			.	.	.
Query Sequence		D	F	G	T	G	L	S	N	L	K	R	F	Y	E	I	N	P	D	S	I	K	V	D	S	Q	F	T	G	D	I	F	G	T	.	.	.	.	A	G	K	I	V	R	I	I	F	D	L	A	R	Y	N	R	I	P	.	.	.	V	I	A	E
Query Conservation																																			.	.	.	.																			.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.																				.	.	.	.																			.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.
Template Sequence		D	V	G	G	G	.	.	.	.	.	.	.	.	.	L	G	V	D	Y	E	G	T	R	S	Q	S	D	C	S	V	N	Y	G	L	N	E	Y	A	N	N	I	I	W	A	I	G	D	A	C	E	E	N	G	L	P	H	P	T	V	I	T	E
Template Known Secondary structure					S		.	.	.	.	.	.	.	.	.					S	S	S	S		S	S	S	T	T			S	S																					T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.
Template SS confidence
		308	.	310	.	.										.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions