Job Description P75800 Confidence 83.94% Date Thu Jan 5 12:14:19 GMT 2012 Rank 99 Aligned Residues 101 % Identity 18% Template c3nhzA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:two component system transcriptional regulator mtra; PDBTitle: structure of n-terminal domain of mtra Resolution 2.50 Å

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		663	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720		.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		R	I	N	E	H	F	Y	L	N	I	E	Q	L	R	K	Q	G	V	R	I	S	I	D	D	F	G	T	G	L	S	N	L	K	R	F	Y	E	I	N	P	D	S	I	K	V	D	S	Q	F	T	G	D	I	F	G	T	A	G	.	K	I	V	R	I	I	F	D	L	A	R	Y	N	R	I	P	V	I	A	E	G
Query Conservation																																																												.
Alig confidence																								.	.																							.	.	.	.									.									.	.
Template Conservation																								.	.																							.	.	.	.																		.	.
Template Sequence		D	D	A	S	L	A	E	M	L	T	I	V	L	R	G	E	G	F	D	T	A	V	.	.	I	G	D	G	T	Q	A	L	T	A	V	R	E	L	R	P	D	L	V	L	L	D	.	.	.	.	L	M	L	P	G	M	N	G	I	D	V	C	R	V	L	R	A	.	.	D	S	G	V	P	I	V	M	L	T	A
Template Known Secondary structure		S															T	T						.	.				G	G	G											S						.	.	.	.	S	S		S	S	S												.	.
Template Predicted Secondary structure																								.	.																							.	.	.	.																		.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.					.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.
		742	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	S	E	D	V	A	R	E	L	I	K	L	G	C	V	Q	A	Q	G	Y	L	Y	Q	K	P	M	P	F	S	A	W	D	K
Query Conservation
Alig confidence																			.	.	.	.
Template Conservation																			.	.	.	.
Template Sequence		K	T	D	T	V	D	V	V	L	G	L	E	S	G	A	D	D	.	.	.	.	Y	I	M	K	P	F	K	P	K	E	L	V	A
Template Known Secondary structure		T	T		S	S								T	T				.	.	.	.					S
Template Predicted Secondary structure																			.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.					.	.	.	.	.	.	.	.	110	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions