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Job DescriptionP75800
Confidence99.22%DateThu Jan 5 12:14:19 GMT 2012
Rank29Aligned Residues227
% Identity7%Templatec3lifA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:putative diguanylate cyclase (ggdef) with pas/pac domain; PDBTitle: crystal structure of the extracellular domain of the putative2 histidine kinase rphk1s-z16
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  NYQLVSERAVKRADSRFELIQKNVGYFFKDIERSALTLKDSLYLLKNT. EEIQRAVILKMEMMPFLDSVGLVLDDNKYYL
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Template Sequence  SHKIALAQSETEXRNLSHSLAEHATHTFQGADVVLDDIVSFXKWRPHPSPVFNERLRALADNLPQLSDVAILDADGQLT.
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Query Sequence  FSRRANDKIVVYHQEQVNGPLVDESGRVIFADFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLHINGKDHDLL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . YASVKPVPALDNSDRSYFRYHRANDDHTLLITGPIQSRTSGVWVFVVSRRLE. . TTDGK
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Query Sequence  AVDKIHVDLNWRYLNEYLD. . QISANDEVLFLKQGHEIIAKNQLAREKLIIYN. . . . . . . . . . . SEGNYNIIDSVDTEYI
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Template Sequence  FFGVVVATIESEYFSTFYKTFDLGPGGSISLLHSDGRLLIQWPSLQTGRDXANXVLFQKALPRSPDGYYLTVSPFDGLTK
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   180.........190.........200.........210.........220.........230.........240.........250.........
 
   257..260.........270.........280.
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Query Sequence  EKTSAVPNNALFEIYFYYPGGNLLN
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Template Sequence  YLAYRRVSRYPLVVTVARTEDSVLS
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   260.........270.........280....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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