Job Description P75800 Confidence 99.47% Date Thu Jan 5 12:14:19 GMT 2012 Rank 25 Aligned Residues 249 % Identity 11% Template c3licA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of the extracellular domain of the putative2 histidine kinase sohk1s-z6 Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	Q	L	V	S	E	R	A	V	K	R	A	D	S	R	F	E	L	I	Q	K	N	V	G	Y	F	F	K	D	I	E	R	S	A	L	T	L	K	D	S	L	Y	L	L	K	N	T	E	E	I	Q	R	A	V	I	L	K	M	E	M	M	P	F	L	D	S	V	G	L	V	L	D	D	N	K	Y	Y	L	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	Y	L	S	I	E	K	R	L	Y	E	N	L	A	Q	E	S	S	H	S	A	S	R	L	Q	F	L	L	E	H	A	Q	A	N	T	Q	G	L	S	D	F	I	G	L	L	A	D	K	D	D	I	N	N	P	E	K	L	K	T	V	L	T	N	R	I	Q	R	N	P	D	F	F	G	S	A	I	A	F	K	P
Template Known Secondary structure																																																	T	T	T	T	T																	T	T										T
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	R	A	N	D	K	I	V	V	Y	H	Q	E	Q	V	N	G	P	L	V	D	E	S	G	R	V	I	F	A	D	F	N	P	S	K	R	P	W	S	V	A	S	D	D	S	N	N	S	W	N	P	A	Y	N	C	F	D	R	P	G	K	K	C	I	S	F	T	L	H	I	N	G	K	D	H	D	L	L	A
Query Conservation
Alig confidence																																																																										.	.
Template Conservation																																																																										.	.
Template Sequence		N	T	F	P	N	K	K	L	F	S	P	Y	V	Y	R	S	G	S	G	F	N	Y	L	D	I	G	A	D	G	Y	D	Y	T	D	G	N	W	D	W	W	S	K	A	I	N	Q	V	G	G	Y	W	S	K	A	Y	F	D	E	G	A	G	N	V	L	X	I	T	Y	A	V	P	F	.	.	G	V	Q	P	D	Y
Template Known Secondary structure		T	S	S	T	T		S		B								S	S	S										T			T	T	S	S	S						T	T	T	T	T	S	S										T	T	T	T		S										.	.	S		T	T
Template Predicted Secondary structure																																																																										.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.																.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	K	I	H	V	D	L	N	W	R	Y	L	N	E	Y	L	D	Q	I	S	A	N	D	E	V	L	F	L	K	Q	G	H	E	I	I	A	K	N	Q	L	A	R	E	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	I	Y	N	S	E	G	N	Y	N	I	I	D	S	V	D	T	E	Y
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.
Template Sequence		F	G	V	T	T	V	D	L	A	L	D	R	L	P	E	Q	L	.	.	G	I	A	P	S	R	L	V	V	L	D	D	Q	G	R	L	I	F	H	S	D	K	E	K	V	L	A	G	W	L	D	K	Q	N	I	K	N	I	A	F	A	T	L	L	N	D	G	Q	A	G	Q	A	S	F	V	D	D	K	G	T	V
Template Known Secondary structure											G	G	G						.	.	T	S		G	G	G						T	T	S						S	S					T				S		T	T	S	G	G	G										T										T	T
Template Predicted Secondary structure																			.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	K	T	S	A	V	P	N	N	A	L	F	E	I	Y	F	Y	Y	P	G	G	N	L	L	N	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	L	A	S	V	A	E	V	A	K	L	K	W	R	V	V	V	X	V	P	K	H	E	L	F	A	S	L
Template Known Secondary structure										T	T	T
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions