Job Description P75800 Confidence 99.38% Date Thu Jan 5 12:14:19 GMT 2012 Rank 28 Aligned Residues 239 % Identity 13% Template c3liaA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:hypothetical sensory transduction histidine kinase; PDBTitle: crystal structure of the extracellular domain of the putative2 histidine kinase mmhk1s-z2 Resolution 1.99 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		E	R	A	V	K	R	A	D	S	R	F	E	L	I	Q	K	N	V	G	Y	F	F	K	D	I	E	R	S	A	L	T	L	K	D	S	L	Y	L	L	K	.	.	N	T	E	E	I	Q	R	A	V	I	L	K	M	E	M	M	P	F	L	D	S	V	G	L	V	L	D	D	N	K	Y	Y	L	F	S	R	R	A
Query Conservation																																										.	.
Alig confidence																																										.	.
Template Conservation
Template Sequence		K	L	A	Y	E	K	S	I	E	M	A	G	N	Y	A	N	Q	F	D	A	Q	M	E	A	N	Q	A	I	A	R	T	L	A	C	T	M	A	E	Y	G	S	Q	D	R	E	E	A	M	S	I	I	K	R	I	L	N	E	N	P	Q	L	I	G	V	Y	L	G	Y	E	P	D	A	F	D	G	R	D	K	N	Y
Template Known Secondary structure																																										S																		T	T		S								T	T	T	T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		N	D	K	I	V	V	Y	H	Q	E	Q	V	N	G	P	L	V	D	E	S	G	R	V	I	F	A	.	D	F	N	P	S	K	R	P	W	S	V	A	S	D	D	S	N	N	S	W	N	P	A	Y	N	C	F	D	R	P	G	K	K	C	I	S	F	T	L	H	I	N	G	K	D	H	D	L	L	A	V	D	K
Query Conservation																												.
Alig confidence																												.																												.	.															.	.	.
Template Conservation																																																								.	.															.	.	.
Template Sequence		I	N	A	P	G	H	D	S	T	G	R	F	V	P	Y	C	N	K	I	N	G	P	V	I	I	E	P	L	V	H	Y	D	S	S	D	Y	Y	Q	L	P	K	T	T	G	K	D	T	L	T	E	P	Y	F	Y	.	.	E	G	I	F	M	V	S	Y	D	S	P	I	F	K	.	.	.	N	G	E	F	A	G	I
Template Known Secondary structure		T	T		T	T			T	T										T	T	S	S									T	T	T												S										.	.	T	T													.	.	.	T	T
Template Predicted Secondary structure																																																								.	.															.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.				.	190	.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.																			.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	H	V	D	L	N	W	R	Y	L	N	E	Y	L	D	.	.	Q	I	S	A	N	D	E	V	L	F	L	K	Q	G	H	E	I	I	A	K	N	Q	L	A	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	I	I	Y	N	S	E	G	N	Y	N	I	I	D	S	V	D	T
Query Conservation																	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	V	D	V	P	L	E	Y	V	D	D	V	A	S	S	I	R	T	F	D	T	G	Y	A	F	M	V	S	N	T	G	I	F	L	S	H	P	T	Q	K	N	W	I	G	E	K	S	L	S	D	F	D	V	E	E	I	K	N	A	A	S	D	I	R	E	G	I	G	G	H	V	E	I	K	D	P	I	T	G
Template Known Secondary structure																T	T			B	T	T	T	B							T	T		B	B	S			S	S		G	G	G	T	T	T		B	G	G	G	S	S													T	T										T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	I	E	K	T	S	A	V	P	N	N	A	L	F	E	I	Y	F	Y	Y	P	G	G	N	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	T	V	I	M	F	Y	E	P	V	K	T	G	D	F	S	F	V	L	V	V	P	K	E	E	M	L
Template Known Secondary structure												T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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