Job Description P75800 Confidence 99.87% Date Thu Jan 5 12:14:19 GMT 2012 Rank 21 Aligned Residues 155 % Identity 10% Template c3ignA_ PDB info PDB header:transferase Chain: A: PDB Molecule:diguanylate cyclase; PDBTitle: crystal structure of the ggdef domain from marinobacter2 aquaeolei diguanylate cyclase complexed with c-di-gmp -3 northeast structural genomics consortium target mqr89a Resolution 1.83 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	R	S	N	K	L	L	S	L	I	S	Y	D	Q	E	S	G	F	I	K	N	M	A	I	I	E	S	N	N	N	Q	Y	L	A	V	G	I	I	K	L	C	G	L	E	A	V	E	A	V	F	G	V	D	E	R	N	K	I	V	R	K	L	C	Q	R	I	A	E	K	Y	A	Q	C	C	D	I	V	T	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	X	T	D	R	L	T	G	L	L	N	R	G	T	W	E	N	L	V	D	A	E	Y	E	R	F	R	R	Y	G	Q	A	T	S	L	V	X	F	D	I	D	H	F	K	P	V	N	D	T	Y	G	H	L	A	G	D	E	V	I	R	H	T	A	D	V	T	R	N	N	I	R	Q	S	D	S	A	G	R	Y
Template Known Secondary structure		T	S	S	B		T	T	T		S																																T	T																										T	T	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		441	.	.	.	.	.	.	.	.	450	.						.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.			.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
Predicted Secondary structure													.	.	.	.	.																																	.	.
Query SS confidence													.	.	.	.	.																																	.	.
Query Sequence		N	A	D	L	Y	L	L	L	C	R	E	.	.	.	.	.	N	V	Q	T	F	T	R	K	I	A	M	V	N	D	F	D	S	S	F	G	Y	R	N	L	R	I	H	K	S	A	I	C	.	.	E	P	L	Q	G	E	N	A	W	S	Y	A	E	K	L	K	L	A	I	S	S	I	R	D	H	M	F	S	E	F
Query Conservation													.	.	.	.	.																																	.	.
Alig confidence													.	.	.	.	.																																	.	.
Template Conservation
Template Sequence		G	G	E	E	F	G	I	I	L	P	E	T	D	A	E	S	A	R	V	I	C	E	R	I	R	E	A	I	E	K	S	T	V	S	T	S	A	G	D	I	Q	Y	T	V	S	X	G	I	A	Q	L	T	E	T	P	E	N	Y	X	Q	W	X	Q	K	A	D	E	A	L	Y	K	A	K	E	S	G	R	N	K	V
Template Known Secondary structure		S	S	S								T																			T						S	S																S			S	S																		T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		514	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		314	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions