Return to main results Retrieve Phyre Job Id

Job DescriptionP75800
Confidence100.00%DateThu Jan 5 12:14:19 GMT 2012
Rank3Aligned Residues246
% Identity19%Templatec3hvbB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:protein fimx; PDBTitle: crystal structure of the dual-domain ggdef-eal module of2 fimx from pseudomonas aeruginosa
Resolution2.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   526...530.........540.........550.........560.........570.........580.........590.........600.....
Predicted Secondary structure 



















Query SS confidence 















































































Query Sequence  ENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEF
Query Conservation          
  
          

            
 
 
          
  

  

           
        
Alig confidence 















































































Template Conservation   
      
  

      
  



   
  
   
 
 
        
    
            

   
      
Template Sequence  QRGDVIAILQQALETNSFRLLFQPVISLRGDSHENYEVLLRLLNPQGQEVPPAEFLHAAKEAGLAEKIDRWVILNSIKLL
Template Known Secondary structure 



T


SSS

S
TTSS
TST
Template Predicted Secondary structure 


















Template SS confidence 















































































   439440.........450.........460.........470.........480.........490.........500.........510........
 
   606...610.........620.........630.........640.........650.........660.........670.........680.....
Predicted Secondary structure 





















Query SS confidence 















































































Query Sequence  RHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISID
Query Conservation                  

 
                          
  

 
                
   
    

Alig confidence 






...





































































Template Conservation         ...    
 



   
        
   
         




 
             
  
   
  



Template Sequence  AEHRAKG. . . HQTKLFVHLSSASLQDPGLLPWLGVALKAARLPPESLVFQISEADATSYLKQAKQLTQGLATLHCQAAIS
Template Known Secondary structure  TTT...




TTTTTTGGGT

TT
TTT
Template Predicted Secondary structure 

...


















Template SS confidence 















































































   519520..... ....530.........540.........550.........560.........570.........580.........590.....
 
   686...690.........700.........710.........720. ........730.........740.........750.........760....
Predicted Secondary structure 














.












Query SS confidence 



































.










































Query Sequence  DFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK. IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLY
Query Conservation 


 
 


  
        


             .        
       





       
        


  
Alig confidence 



































.










































Template Conservation 


     
  
  
  
 



               
   
         


 


       
   
    

   
Template Sequence  QFGCSLNPFNALKHLTVQFIKIDGSFVQDLNQVENQEILKGLIAELHEQQKLSIVPFVESASVLATLWQAGATYIQGYYL
Template Known Secondary structure  T
SSSTTGGGGTS

S
GGGGSSTTSTT




ST
S

TTT
Template Predicted Secondary structure 
































Template SS confidence 















































































   596...600.........610.........620.........630.........640.........650.........660.........670.....
 
   765....770....
Predicted Secondary structure 




Query SS confidence 









Query Sequence  QKPMPFSAWD
Query Conservation    
 
  
  
Alig confidence 









Template Conservation    
    

 
Template Sequence  QGPSQAMDYD
Template Known Secondary structure 


BSS



Template Predicted Secondary structure 






Template SS confidence 









   676...680.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions