Job Description P75800 Confidence 100.00% Date Thu Jan 5 12:14:19 GMT 2012 Rank 2 Aligned Residues 371 % Identity 17% Template c3gfzB_ PDB info PDB header:hydrolase, signaling protein Chain: B: PDB Molecule:klebsiella pneumoniae blrp1; PDBTitle: klebsiella pneumoniae blrp1 ph 6 manganese/cy-digmp complex Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430						.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.
Query Sequence		R	S	N	K	L	L	S	L	I	S	Y	D	Q	E	S	G	F	I	K	N	M	A	I	I	E	S	N	N	N	Q	Y	L	A	V	G	I	I	K	L	C	G	L	E	A	V	E	A	V	F	G	V	D	E	R	N	K	I	V	R	K	L	C	Q	R	I	A	E	K	.	.	.	.	.	Y	A	Q	C	C	D	I
Query Conservation																																																																						.	.	.	.	.
Alig confidence																																																	.	.																				.	.	.	.	.
Template Conservation																																																	.	.
Template Sequence		Y	R	S	Q	V	H	P	D	R	P	P	V	D	L	D	A	L	V	H	R	A	S	S	K	N	L	P	L	G	I	T	G	I	L	L	F	N	G	L	Q	F	F	Q	V	L	E	G	.	.	T	E	E	A	L	E	S	L	F	S	E	I	Q	S	D	P	R	H	R	D	V	V	E	L	M	R	D	Y	S	A	Y
Template Known Secondary structure								T	T	S																				T									S	S									.	.														T		T	T													S	S
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	F	N	A	D	L	Y	L	L	L	C	R	E	N	V	Q	T	F	T	R	K	I	A	M	V	N	D	F	D	S	S	F	G	Y	R	N	L	R	I	H	K	S	A	I	C	E	P	L	Q	G	E	N	A	W	S	Y	A	E	K	L	K	L	A	I	S	S	I	R	D	H	M	F	S	E	F	I	F	C	D
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	R	F	H	G	T	G	M	R	I	L	D	L	R	L	F	E	T	D	G	A	L	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	L	R	F	S	T	F	G	V	T	E	P	V	N	D	R	M	F	R	L	L	S	A	F	I	A	D	G	G	R	Y	C	L	P	E
Template Known Secondary structure			S			S	S	S						G	G	G			T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S	S		G	G	G	S													G	G	G	G				G
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.																						.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		518	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.		.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		D	A	K	L	N	E	I	E	E	N	I	W	I	A	R	N	I	R	H	A	M	E	I	G	E	L	F	L	V	Y	Q	P	I	V	D	I	N	T	R	A	I	L	G	A	E	A	L	C	R	W	V	S	A	E	R	.	G	I	I	S	P	L	K	F	I	T	I	A	E	D	I	G	F	I	N	E	L	G	Y	Q
Query Conservation																																																									.
Alig confidence								.	.	.	.	.	.																																												.
Template Conservation								.	.	.	.	.	.
Template Sequence		P	L	Q	P	S	R	.	.	.	.	.	.	W	M	M	M	A	P	Q	H	L	P	G	Q	P	C	Q	F	A	L	Q	A	I	V	E	P	A	K	K	R	V	S	S	F	E	A	L	I	R	S	P	T	G	G	S	P	V	E	M	F	A	A	I	A	A	E	D	R	Y	R	F	D	L	E	S	K	A	Y	A	F
Template Known Secondary structure		G	G		G	G	G	.	.	.	.	.	.										T	T	S	S											T	T	T	T												T	T	S									T	S		G	G	G								T
Template Predicted Secondary structure								.	.	.	.	.	.
Template SS confidence
		144	.	.	.	.	.							150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		597	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.		630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		I	I	K	T	A	M	G	E	F	R	H	F	S	Q	R	A	S	L	K	D	D	F	L	L	H	I	N	V	S	P	W	Q	L	.	N	E	P	H	F	H	E	R	F	T	T	I	M	K	E	N	G	L	K	A	N	S	L	C	V	E	I	T	E	T	V	I	E	R	I	N	E	H	F	Y	L	N	I	E	Q	L
Query Conservation																																			.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	A	G	Q	L	P	L	.	.	.	.	.	.	.	.	.	.	.	G	K	H	Q	L	A	I	N	L	L	P	G	S	L	Y	H	H	P	D	A	V	G	W	L	M	D	S	L	L	A	A	G	L	R	P	D	Q	V	L	I	E	V	T	E	T	E	V	I	T	C	F	D	Q	F	R	K	V	L	K	A	L
Template Known Secondary structure							T	T		.	.	.	.	.	.	.	.	.	.	.		S														S	S	S	S												T	T			G	G	G												T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.												.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		676	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.			720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.
Predicted Secondary structure																																														.	.
Query SS confidence																																														.	.
Query Sequence		R	K	Q	G	V	R	I	S	I	D	D	F	G	T	G	L	S	N	L	K	R	F	Y	E	I	N	P	D	S	I	K	V	D	S	Q	F	T	G	D	I	F	G	T	A	.	.	G	K	I	V	R	I	I	F	D	L	A	R	Y	N	R	I	P	V	I	A	E	G	V	E	S	E	D	V	A	R	E	L	I	K
Query Conservation																																														.	.
Alig confidence																																														.	.
Template Conservation
Template Sequence		R	V	A	G	M	K	L	A	I	D	D	F	G	A	G	Y	S	G	L	S	L	L	T	R	F	Q	P	D	K	I	K	V	D	A	E	L	V	R	D	I	H	I	S	G	T	K	Q	A	I	V	A	S	V	V	R	C	C	E	D	L	G	I	T	V	V	A	E	G	V	E	T	L	E	E	W	C	W	L	Q	S
Template Known Secondary structure					T									T	S	S	S			S	T								S										T	T	G	G	G	B																		T										S
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		754	.	.	.	.	.	760	.	.	.	.	.	.	.					.	.	770	.	.	.
Predicted Secondary structure																.	.	.	.
Query SS confidence																.	.	.	.
Query Sequence		L	G	C	V	Q	A	Q	G	Y	L	Y	Q	K	P	.	.	.	.	M	P	F	S	A	W
Query Conservation																.	.	.	.
Alig confidence																.	.	.	.
Template Conservation
Template Sequence		V	G	I	R	L	F	Q	G	F	L	F	S	R	P	C	L	N	G	I	G	E	I	C	W
Template Known Secondary structure		T	T						S	T	T	T						T	S
Template Predicted Secondary structure
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions