Job Description P75800 Confidence 99.08% Date Thu Jan 5 12:14:19 GMT 2012 Rank 31 Aligned Residues 214 % Identity 8% Template c3e4pB_ PDB info PDB header:transferase Chain: B: PDB Molecule:c4-dicarboxylate transport sensor protein dctb; PDBTitle: crystal structure of malonate occupied dctb Resolution 2.30 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	K	R	A	D	S	R	F	E	L	I	Q	K	N	V	G	Y	F	F	K	D	I	E	R	S	A	L	T	L	K	D	S	L	Y	L	L	K	N	T	E	E	I	Q	R	A	V	I	L	K	M	E	M	M	P	F	L	D	S	V	G	L	V	L	D	D	N	K	Y	Y	L	F	S	R	R	A	N	D	K	I
Query Conservation
Alig confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	G	Q	S	R	I	D	A	S	L	K	A	S	L	L	R	A	V	V	E	R	Q	R	A	L	P	L	V	L	A	D	D	A	A	I	R	G	A	L	L	S	P	D	R	P	S	L	D	R	I	N	R	K	L	E	A	L	A	T	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A
Template Known Secondary structure																																T	T										S																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.																	.	120
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		V	V	Y	H	Q	E	Q	V	N	G	P	L	V	D	E	.	.	.	S	G	R	V	I	F	A	D	F	N	P	S	K	R	P	W	S	V	A	S	D	D	S	N	N	S	W	N	P	A	Y	N	C	F	D	R	P	G	K	K	C	I	S	F	T	L	H	I	N	G	K	D	H	D	L	L	A	V	D	K	I	H
Query Conservation																	.	.	.
Alig confidence																	.	.	.																													.	.																					.	.	.
Template Conservation																																																.	.																					.	.	.
Template Sequence		A	V	I	Y	L	I	D	R	S	G	V	A	V	A	A	S	N	W	Q	E	P	T	S	F	V	G	N	D	Y	A	F	R	D	Y	F	R	L	A	V	R	D	G	M	A	E	H	.	.	F	A	M	G	T	V	S	K	R	P	G	L	Y	I	S	R	R	V	D	G	.	.	.	P	G	G	P	L	G	V	I	V
Template Known Secondary structure		S							T	T	S	B					T	T	T	T	S	T	T			T	T		B		T	T											S					.	.					T	T	T														.	.	.	T	T
Template Predicted Secondary structure																																																.	.																					.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240																																			.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	L	N	W	R	Y	L	N	E	Y	L	D	Q	I	S	A	N	D	E	V	L	F	L	K	Q	G	H	E	I	I	A	K	N	Q	L	A	R	E	K	L	I	I	Y	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.
Template Sequence		A	K	L	E	F	D	G	V	E	A	D	W	Q	.	.	A	S	G	K	P	A	Y	V	T	D	R	R	G	I	V	L	I	T	S	L	P	S	W	R	F	M	T	T	K	P	I	A	E	D	R	L	A	P	I	R	E	S	L	Q	F	G	D	A	P	L	L	P	L	P	F	R	K	I	E	A	R	P	D	G	S
Template Known Secondary structure															.	.	T	T	S	S							T	T		B					S	S	G	G	G	T	T		B	S	S				S	T	T								T	T		T	T					B		S								T	T	S
Template Predicted Secondary structure															.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	N	Y	N	I	I	D	S	V	D	T	E	Y	I	E	K	T	S	A	V	P	N	N	A	L	F	E	I	Y	F	Y	Y	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	T	L	D	A	L	L	P	G	D	S	T	A	A	F	L	R	V	E	T	M	V	P	S	T	N	W	R	L	E	Q	L	S	P
Template Known Secondary structure									S	S	S													T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions