Job Description P75800 Confidence 50.41% Date Thu Jan 5 12:14:19 GMT 2012 Rank 259 Aligned Residues 106 % Identity 18% Template c3dzdA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4 in the inactive2 state Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		663	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	N	E	H	F	Y	L	N	I	E	Q	L	R	K	Q	G	V	R	I	S	I	D	D	F	G	T	G	L	S	N	L	K	R	F	Y	E	I	N	P	D	S	I	K	V	D	S	Q	F	T	G	D	I	F	G	T	A	G	K	I	V	R	I	I	F	D	L	A	R	Y	N	R	I	P	V	I	A	E	G	V
Query Conservation
Alig confidence																								.	.																							.	.	.																									.
Template Conservation																								.	.																							.	.	.																									.
Template Sequence		D	E	E	S	I	T	S	S	L	S	A	I	L	E	E	E	G	Y	H	P	D	T	.	.	A	K	T	L	R	E	A	E	K	K	I	K	E	L	F	F	P	V	I	V	L	D	.	.	.	V	W	X	P	D	G	D	G	V	N	F	I	D	F	I	K	E	N	S	P	D	S	V	V	.	I	V	I	T	G	H
Template Known Secondary structure		S															T	T						.	.		S	S											S			S						.	.	.	S			T	T			T	T	T										T	T				.						S
Template Predicted Secondary structure																								.	.																							.	.	.																									.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.				.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.
		743	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	E	D	V	A	R	E	L	I	K	L	G	C	V	Q	A	Q	G	Y	L	Y	Q	K	P	M	P	F	S	A	W	D	K	S	G	K
Query Conservation
Alig confidence																		.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		G	S	V	D	T	A	V	K	A	I	K	K	G	A	Y	E	.	.	.	.	F	L	E	K	P	F	S	V	E	R	F	L	L	T	I	K
Template Known Secondary structure		S												T				.	.	.	.				S	S
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.					.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions