Return to main results Retrieve Phyre Job Id

Job DescriptionP75800
Confidence88.66%DateThu Jan 5 12:14:19 GMT 2012
Rank66Aligned Residues136
% Identity13%Templatec2pz0B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:glycerophosphoryl diester phosphodiesterase; PDBTitle: crystal structure of glycerophosphodiester phosphodiesterase (gdpd)2 from t. tengcongensis
Resolution1.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   598.600.........610.........620.........630.........640.........650.........660.........670.......
Predicted Secondary structure 


















Query SS confidence 















































































Query Sequence  IKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRK
Query Conservation                          

 
                          
  

 
                
  
Alig confidence 









........
































.

















........

Template Conservation 
 
 
     ........      



                
      .  
 
 
           ........  
Template Sequence  LYEVFELIGD. . . . . . . . KDFLVNIEIKSGIVLYPGIEEKLIKAIKEYNFE. ERVIISSFNHYSLRDVKK. . . . . . . . MA
Template Known Secondary structure  TT........S



SSS

TTTT
T.TTS
........
Template Predicted Secondary structure 


........












.



........
Template SS confidence 















































































   102.......110. ........120.........130.........140.... .....150.........160.. ..
 
   678.680.........690.........700.........710.........720.........730.........740.........750.......
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  QGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCV
Query Conservation   
    




 
 


  
        


                     
       





       
      
Alig confidence 



































..........

































Template Conservation 
                          
        ..........   
      
  
  



       
   


Template Sequence  PHLKIGLLYQCGLVEPWHMALRMEAYSLHPFYFNII. . . . . . . . . . PELVEGCKKNGVKLFPWTVDRKEDMERMIKAGVD
Template Known Secondary structure  TTS
S

SSTTT
SBGGG

..........TTT


B


ST
S
Template Predicted Secondary structure 














..........










Template SS confidence 















































































   165....170.........180.........190.........200 .........210.........220.........230....
 
   758.760
Predicted Secondary structure 
Query SS confidence 


Query Sequence  QAQ
Query Conservation    
Alig confidence 


Template Conservation 

 
Template Sequence  GII
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 


   235..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions