Job Description P75800 Confidence 89.11% Date Thu Jan 5 12:14:19 GMT 2012 Rank 61 Aligned Residues 111 % Identity 10% Template c2jk1A_ PDB info PDB header:dna-binding Chain: A: PDB Molecule:hydrogenase transcriptional regulatory protein hupr1; PDBTitle: crystal structure of the wild-type hupr receiver domain Resolution 2.10 Å

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		661	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	R	I	N	E	H	F	Y	L	N	I	E	Q	L	R	K	Q	G	V	R	I	S	I	D	D	F	G	T	G	L	S	N	L	K	R	F	Y	E	I	N	P	D	S	I	K	V	D	S	Q	F	T	G	D	I	F	G	T	A	G	K	I	V	R	I	I	F	D	L	A	R	Y	N	R	I	P	V	I	A	E
Query Conservation
Alig confidence																										.	.																							.	.	.
Template Conservation																										.	.																							.	.	.
Template Sequence		L	V	D	D	E	P	H	S	L	A	A	M	K	L	A	L	E	D	D	F	D	V	L	T	.	.	A	Q	G	A	E	A	A	I	A	I	L	E	E	E	W	V	Q	V	I	I	C	D	.	.	.	Q	R	M	P	G	R	T	G	V	D	F	L	T	E	V	R	E	R	W	P	E	T	V	R	I	I	I	T	G
Template Known Secondary structure					S	S												T	T	T	S					.	.		S	S											S									.	.	.	S			S	S	S														T	T	S							S
Template Predicted Secondary structure																										.	.																							.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		741	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	E	S	E	D	V	A	R	E	L	I	K	L	G	C	V	Q	A	Q	G	Y	L	Y	Q	K	P	M	P	F	S	A	W	D	K	S	G	K	L	V
Query Conservation
Alig confidence																			.	.	.	.
Template Conservation																			.	.	.	.
Template Sequence		Y	T	D	S	A	S	M	M	A	A	I	N	D	A	G	I	H	.	.	.	.	Q	F	L	T	K	P	W	H	P	E	Q	L	L	S	S	A	R	N	A
Template Known Secondary structure			T	T											T	T			.	.	.	.					S	S
Template Predicted Secondary structure																			.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.					.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions