 |
Job Description | P75800 | Confidence | 20.58% | Date | Thu Jan 5 12:14:19 GMT 2012 |
Rank | 398 | Aligned Residues | 84 |
% Identity | 17% | Template | c2dzdB_ |
PDB info |
PDB header:ligase | Chain: B: PDB Molecule:pyruvate carboxylase; |
PDBTitle: crystal structure of the biotin carboxylase domain of2 pyruvate carboxylase
|
Resolution | 2.40 Å |
|
 |
  |   |
666 | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | |
. | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | |
|
|
. | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | H | F | Y | L | N | I | E | Q | L | R | K | Q | G | V | R | . |
I | S | I | D | D | F | G | T | G | L | S | N | L | K | R | F | Y | E | I | N | P | D | S | I | K | V | D | S | Q | F | T | G | D | I | F | G | T | A | G | K | I | . |
. |
. |
V | R | I | I | F | D | L | A | R | Y | N | R | I | P | V | I | A | E | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   | . |   |   |
|
|
|
|
|   |
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|
|
|
|
|   |   |   |
|   |   |
|
|   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |
| . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
Template Sequence |   |
E | I | A | I | R | V | F | R | A | C | T | E | L | G | I | R | T | V | A | I | Y | S | K | E | D | V | G | S | Y | H | R | Y | K | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
D | E | A | Y | L | V | G | E | G | K | K | P | I | E | A | Y | L | D | I | E | G | I | I | E | I | A | K | A | H | D | V | D | A | I | H | P | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
| G | G | G | G | G |
| G | G | G | G | G | S | . | . | . | . | . | . | . | . | . | S |  |  |  |  |
| S | T | T | S |
|  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
| . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
742 | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
V | E | S | E | D | V | A | R | E | L | I | K | L | G | C | V | Q |
Query Conservation |   |
. | . | . | . |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
. | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |
Template Sequence |   |
Y | G | F | L | S | E | N | I | Q | F | A | K | R | C | R | E | E | G | I | I | F |
Template Known Secondary structure |   |
S | S | S | S | T | T |
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|