Job Description P75800 Confidence 58.64% Date Thu Jan 5 12:14:19 GMT 2012 Rank 236 Aligned Residues 92 % Identity 14% Template c1djnB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:trimethylamine dehydrogenase; PDBTitle: structural and biochemical characterization of recombinant wild type2 trimethylamine dehydrogenase from methylophilus methylotrophus (sp.3 w3a1) Resolution 2.20 Å

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		668	.	670	.	.	.	.	.	.	.								.	.	680	.	.	.	.	.	.	.	.		.	690								.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.									.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.												.			.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.												.			.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Query Sequence		F	Y	L	N	I	E	Q	L	R	K	.	.	.	.	.	.	.	Q	G	V	R	I	S	I	D	D	F	G	.	T	G	.	.	.	.	.	.	.	L	S	N	L	K	R	F	Y	E	I	N	P	D	S	I	K	V	.	.	.	.	.	.	.	.	D	S	Q	F	T	G	D	I	F	G	T	A	G	K	I	V	R
Query Conservation												.	.	.	.	.	.	.												.			.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.												.			.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	L	E	T	L	E	K	V	K	H	A	V	G	S	D	C	A	I	A	T	R	F	G	V	D	T	V	Y	G	P	G	Q	I	E	A	E	V	D	G	Q	K	F	V	E	M	A	D	S	L	V	D	M	W	D	I	T	I	G	D	I	A	E	W	G	E	D	A	G	P	S	R	F	Y	Q	Q	G	H	T	I	P
Template Known Secondary structure														T	T	T	S											S	S		T	T	S			T	T	T										T	T	T		S							S		S	T	T	G	G	G	T	S			T	T	T			T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		725	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.		.	.	.	.	.	.	.	.	750	.	.	.	.	.		.	.	.	.
Predicted Secondary structure																			.															.
Query SS confidence																			.															.
Query Sequence		I	I	F	D	L	A	R	Y	N	R	I	P	V	I	A	E	G	.	V	E	S	E	D	V	A	R	E	L	I	K	L	G	.	C	V	Q	A
Query Conservation																			.															.
Alig confidence																			.															.
Template Conservation
Template Sequence		W	V	K	L	V	K	Q	V	S	K	K	P	V	L	G	V	G	R	Y	T	D	P	E	K	M	I	E	I	V	T	K	G	Y	A	D	I	I
Template Known Secondary structure								T	T		S	S						S														T	T	S		S	B
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions