Job Description P75763 Confidence 9.22% Date Thu Jan 5 12:13:52 GMT 2012 Rank 9 Aligned Residues 288 % Identity 11% Template d1l7va_ SCOP info ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC Resolution 3.20

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.						.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																																															.	.	.	.	.
Query SS confidence																																															.	.	.	.	.
Query Sequence		K	P	F	P	E	P	V	V	L	L	I	A	V	A	A	S	M	V	V	V	G	N	L	S	D	G	A	F	K	T	T	A	V	L	S	G	Y	S	S	G	T	T	W	L	V	.	.	.	.	.	F	S	A	F	T	L	S	A	A	F	V	T	T	G	L	G	K	R	I	A	Y	L	L	I	G	K	I	G	N	T
Query Conservation																																															.	.	.	.	.
Alig confidence																																															.	.	.	.	.
Template Conservation
Template Sequence		Q	N	I	R	W	L	L	C	L	S	V	L	X	L	L	A	L	L	L	S	L	C	A	G	E	Q	W	I	S	P	G	D	W	F	T	P	R	G	E	L	F	V	W	Q	I	R	L	P	R	T	L	A	V	L	L	V	G	A	A	L	A	I	S	G	A	V	X	Q	A	L	F	E	N	P	L	A	E	P	G	L
Template Known Secondary structure																								B	S	S	S	B			S	G	G	G	S	S	T	T	T	T	T					T																											T		T	T			T	T	T
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	G	L	G	Y	V	T	V	F	L	D	L	V	L	A	P	A	T	P	S	N	T	A	R	A	G	G	I	V	L	P	I	I	N	S	V	A	V	A	L	G	S	E	P	E	K	S	P	R	R	V	G	H	Y	L	M	M	S	I	Y	M	V	T	K	T	T	S	Y	M	F	F	T	A	M	A	G	N	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	V	S	N	G	A	G	V	G	L	I	A	A	V	L	L	G	Q	G	Q	L	P	N	W	A	L	G	L	C	A	I	A	G	A	L	I	I	T	L	I	L	L	R	F	A	R	R	H	L	S	T	S	R	L	L	L	A	G	V	A	L	G	I	I	C	S	A	L	X	T	W	A	I	Y	F	S	T	S	V
Template Known Secondary structure		T	T															T	S		T	T																												T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	K	M	I	N	D	I	L	H	L	Q	I	S	W	G	G	W	A	L	A	A	G	L	P	G	I	I	M	L	L	V	T	P	L	V	I	Y	T	M	Y	P	P	E	I	K	K	V	D	N	K	T	I	A	K	A	G	L	A	E	L	G	P	M	K	I	R	E	K	M	L	L	G	V	F	V	L	A	L	L
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.
Template Sequence		D	L	R	Q	L	X	Y	W	X	X	G	G	F	G	G	V	D	W	R	Q	S	W	L	X	L	A	L	I	P	V	L	L	W	I	C	C	Q	S	R	P	X	.	.	.	.	.	.	.	N	X	L	A	L	G	E	I	S	A	R	Q	L	G	L	P	L	W	F	W	R	N	V	L	V	A	A	T	G	W	X	V
Template Known Secondary structure											T				T	T			G	G	G																						.	.	.	.	.	.	.													T	T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.								.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		284	.	.																						.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	W	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	K	S	L	G	V	D	E	S	T	V	A	I	V	V	M	A	T	M	L	L	L	G	I	V	T	W	E	D	V	V	K	N	K	G	G	W	N	T	L	I	W	Y	G	G	I	I	G	L	S	S	L	L	S	K
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	V	S	V	A	L	A	G	A	I	G	F	I	G	L	V	I	P	H	I	L	R	L	C	G	L	T	D	H	R	V	L	L	P	G	C	A	L	A	G	A	S	A	L	L	L	A	D	I	V	A	R	L	A	L	A	A	A	E	L	P	I	G	V	V	T	A	T	L	G	A	P	V	F	I	W	L	L	L	K
Template Known Secondary structure													S	S	S	S									T	T			S																										S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		343
Predicted Secondary structure
Query SS confidence
Query Sequence		V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		324

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions