Job Description P75763 Confidence 1.47% Date Thu Jan 5 12:13:52 GMT 2012 Rank 43 Aligned Residues 289 % Identity 12% Template c2ht2B_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:h(+)/cl(-) exchange transporter clca; PDBTitle: structure of the escherichia coli clc chloride channel2 y445h mutant and fab complex Resolution 3.32 Å

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		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	A	V	A	L	G	S	E	P	E	K	S	P	R	R	V	G	H	Y	L	M	M	S	I	Y	M	V	T	K	T	T	S	Y	M	F	F	T	A	M	A	G	N	I	L	A	L	K	M	I	N	D	I	L	H	L	Q	I	S	W	G	G	W	A	L	A	A	G	L	P	G	I	I	M	L	L	V	T	P	L
Query Conservation
Alig confidence																																																																												.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.
Template Sequence		Q	L	I	R	Q	L	L	E	R	D	K	T	P	L	A	I	L	F	M	A	A	V	V	G	T	L	V	G	L	A	A	V	A	F	D	K	G	V	A	W	L	Q	N	Q	R	M	G	A	L	V	H	T	A	D	N	Y	P	L	L	L	T	V	A	F	L	C	S	A	V	L	A	M	F	G	.	.	.	.	.	Y
Template Known Secondary structure								T	T	T	T																																										T		S																					.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.						.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	Y	T	M	Y	P	P	E	I	K	K	V	D	N	K	T	I	A	K	A	G	L	A	E	L	G	P	M	K	I	R	E	K	M	L	L	G	V	F	V	L	A	L	L	G	W	I	F	S	K	S	L	G	V	D	E	S	T	V	A	I	V	V	M	A	T	M	L	L	L	G	I	V	T	W	E	D	V	V
Query Conservation
Alig confidence																																	.	.
Template Conservation																																	.	.
Template Sequence		F	L	V	R	K	Y	A	P	E	A	G	G	S	G	I	P	E	I	E	G	A	L	E	D	Q	R	P	V	R	W	W	.	.	R	V	L	P	V	K	F	F	G	G	L	G	T	L	G	G	G	M	V	L	G	R	E	G	P	T	V	Q	I	G	G	N	I	G	R	M	V	L	D	I	F	R	L	K	G	D	E
Template Known Secondary structure						T	T		G	G	G	S	S		S									T	T		S						.	.																T	T		S		B	S																			T	T			S
Template Predicted Secondary structure																																	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	K	G	G	W	N	T	L	I	W	Y	G	G	I	I	G	L	S	S	L	L	S	K	V	K	F	F	E	W	L	A	E	V	F	K	N	N	L	A	F	D	G	H	G	N	V	A	F	F	V	I	I	F	L	S	I	I	V	R	Y	F	F	A	S	G	S	A	Y	I	V	A	M	L	P	V	F	A	M	L
Query Conservation
Alig confidence				.	.	.	.																																																															.	.	.	.	.	.	.
Template Conservation				.	.	.	.																																																															.	.	.	.	.	.	.
Template Sequence		A	R	.	.	.	.	H	T	L	L	A	T	G	A	A	A	G	L	A	A	A	F	N	A	P	L	A	G	I	L	F	I	I	E	E	M	R	P	Q	F	R	Y	T	L	I	S	I	K	A	V	F	I	G	V	I	M	S	T	I	M	Y	R	I	F	N	H	E	V	.	.	.	.	.	.	.	A	L	I	D	V
Template Known Secondary structure				.	.	.	.																	T										T	T	T	T	S		S	S	S																									T	T		.	.	.	.	.	.	.		S
Template Predicted Secondary structure				.	.	.	.																																																															.	.	.	.	.	.	.
Template SS confidence
		173	.					.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.								.	.	.	240	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	V	S	G	A	P	L	M	L	T	A	L	A	L	L	F	S	N	S	Y	G	G	M	V	T	H	Y	G	G	A	A	G	P	V	I	F	G	V	G	Y	N	D	I	K	S	W	W	L	V	G	A	V	L	T	I	L	T	F	L	V	H	I	T	L	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K	L	S	D	A	P	L	N	T	L	W	L	Y	L	I	L	G	I	I	F	G	I	F	G	P	I	F	N	K	W	V	L	G	M	Q	D	L	L	H	R	V	H	G	G	N	I	T	K	W	V	L	M	G	G	A	I	G	G	L	C	G	L	L	G	F	V
Template Known Secondary structure									G	G	G																																T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions