Job Description P75763 Confidence 11.85% Date Thu Jan 5 12:13:52 GMT 2012 Rank 5 Aligned Residues 89 % Identity 18% Template c1ymgA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:lens fiber major intrinsic protein; PDBTitle: the channel architecture of aquaporin o at 2.2 angstrom resolution Resolution 2.24 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	E	K	S	P	R	R	V	G	H	Y	L	M	M	S	I	Y	M	V	T	K	T	T	S	Y	M	F	F	T	A	M	A	G	N	I	L	A	L	K	M	I	N	D	I	L	H	L	Q	I	S	W	G	G	W	A	L	A	A	G	L	P	G	I	I	M	L	L	V	T	P	L	V	I	Y	T	M	Y	P	P
Query Conservation
Alig confidence																																						.																	.								.	.
Template Conservation																																						.																	.								.	.
Template Sequence		D	E	R	R	N	G	R	L	G	S	V	A	L	A	V	G	F	S	L	T	L	G	H	L	F	G	M	Y	Y	T	G	A	G	M	N	P	.	A	R	S	F	A	P	A	I	L	T	R	N	F	T	N	H	.	W	V	Y	W	V	G	P	.	.	V	I	G	A	G	L	G	S	L	L	Y	D	F	L	L	F	P
Template Known Secondary structure			T	T	S		S																															.											T			T	T	T	.	T							.	.													T	T	T	S
Template Predicted Secondary structure																																						.																	.								.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	K	K	V	D	N	K	T	I	A	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	K	S	V	S	E	R	L	S	I	L	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions