Job Description P00448 Confidence 100.00% Date Thu Jan 5 10:56:37 GMT 2012 Rank 11 Aligned Residues 190 % Identity 37% Template c3ceiA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:superoxide dismutase; PDBTitle: crystal structure of superoxide dismutase from helicobacter2 pylori Resolution 2.40 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	T	L	P	S	L	P	Y	A	Y	D	A	L	E	P	H	F	D	K	Q	T	M	E	I	H	H	T	K	H	H	Q	T	Y	V	N	N	A	N	A	A	L	E	S	L	P	E	F	A	N	L	P	V	E	E	L	I	T	K	L	D	Q	L	P	A	D	K	K	T	V	L	R	N	N	A	G	G	H	A	N	H
Query Conservation
Alig confidence																																														.															.	.	.	.	.	.	.
Template Conservation																																														.															.	.	.	.	.	.	.
Template Sequence		F	T	L	R	E	L	P	F	A	K	D	S	M	G	D	F	L	S	P	V	A	F	D	F	H	H	G	K	H	H	Q	T	Y	V	N	N	L	N	N	L	I	K	G	T	.	D	F	E	K	S	S	L	F	A	I	L	T	K	S	.	.	.	.	.	.	.	S	G	G	V	F	N	N	A	A	Q	I	Y	N	H
Template Known Secondary structure								S	S		T	T		S	T	T	T	S									T	T	T														T	T	S	.	T	T	T	T											.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.															.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.								60	.	.	.	.	.	.	.	.	.	70	.	.	.
		83	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.																																														.	.
Query SS confidence											.																																														.	.
Query Sequence		S	L	F	W	K	G	L	K	K	.	G	T	T	L	Q	G	D	L	K	A	A	I	E	R	D	F	G	S	V	D	N	F	K	A	E	F	E	K	A	A	A	S	R	F	G	S	G	W	A	W	L	V	L	K	G	.	.	D	K	L	A	V	V	S	T	A	N	Q	D	S	P	L	M	G	E	A	I	S	G	A
Query Conservation											.																																														.	.
Alig confidence											.																																														.	.																		.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		D	F	Y	W	D	C	L	S	P	K	A	T	A	L	S	D	E	L	K	G	A	L	E	K	D	F	G	S	L	E	K	F	K	E	D	F	I	K	S	A	T	T	L	F	G	S	G	W	N	W	A	A	Y	N	L	D	T	Q	K	I	E	I	I	Q	T	S	N	A	Q	T	P	V	T	D	.	.	.	.	.	.
Template Known Secondary structure							T	B		S	S																	S	S																	S	S									T	T	T										T	T			G	G	G	G	.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	F	P	I	M	G	L	D	V	W	E	H	A	Y	Y	L	K	F	Q	N	R	R	P	D	Y	I	K	E	F	W	N	V	V	N	W	D	E	A	A	A	R	F	A	A	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	K	V	P	L	L	V	V	D	V	W	E	H	A	Y	Y	I	D	H	K	N	A	R	P	V	Y	L	E	K	F	Y	G	H	I	N	W	H	F	V	S	Q	C	Y	E	W	A	K
Template Known Secondary structure		T										S	G	G	G	T					T	T												T	B
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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