Job Description P00448 Confidence 11.69% Date Thu Jan 5 10:56:37 GMT 2012 Rank 92 Aligned Residues 70 % Identity 17% Template c2h4tB_ PDB info PDB header:transferase Chain: B: PDB Molecule:carnitine o-palmitoyltransferase ii, PDBTitle: crystal structure of rat carnitine palmitoyltransferase ii Resolution 1.90 Å

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		4	.	.	.	.	.	10	.	.										.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.
Query Sequence		T	L	P	S	L	P	Y	A	Y	.	.	.	.	.	.	.	.	.	D	A	L	E	P	H	F	D	K	Q	T	M	E	I	H	H	T	K	H	H	Q	T	Y	V	N	N	A	N	A	A	L	E	S	L	P	E	F	A	N	L	P	V	E	E	L	I	T	K	L	D	Q	L	P	A	D	K	K	T	V	L	R	N
Query Conservation											.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template Sequence		S	L	P	R	L	P	I	P	K	L	E	D	T	M	K	R	Y	L	N	A	Q	K	P	L	L	D	D	S	Q	F	R	.	.	.	.	.	.	.	.	.	.	.	.	R	T	E	A	L	C	K	N	F	E	T	G	V	G	K	E	L	H	A	H	L	L	A	Q	D	K	.	.	.	.	.	Q	N	K	H	T	S
Template Known Secondary structure		G			B																		T	T	T	S							.	.	.	.	.	.	.	.	.	.	.	.												T															.	.	.	.	.	T		T	T	S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.													.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.						.	.	.	.	.	110
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	G	G	H	A	N	H	S	L	F	W	K	G	L	K	K
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		Y	I	S	G	P	W	F	D	.	M	Y	L	T	A	R	D	S
Template Known Secondary structure		T	T							.							S
Template Predicted Secondary structure										.
Template SS confidence
		111	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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