Job Description P00448 Confidence 100.00% Date Thu Jan 5 10:56:37 GMT 2012 Rank 7 Aligned Residues 192 % Identity 39% Template c2cw2B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:superoxide dismutase 1; PDBTitle: crystal structure of superoxide dismutase from p. marinus Resolution 1.86 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	T	L	P	S	L	P	Y	A	Y	D	A	L	E	P	H	F	D	K	Q	T	M	E	I	H	H	T	K	H	H	Q	T	Y	V	N	N	A	N	A	A	L	E	S	L	P	E	F	A	N	L	P	V	E	E	L	I	T	K	L	D	Q	L	P	A	D	K	K	T	V	L	R	N	N	A	G	G	H	A	N
Query Conservation
Alig confidence																																																														.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.
Template Sequence		P	F	Q	C	P	P	L	P	Y	V	K	N	A	L	E	P	H	M	S	A	E	T	L	T	Y	H	H	D	K	H	H	Q	T	Y	V	D	T	L	N	S	I	A	A	E	N	S	T	I	A	S	K	T	L	E	Q	I	I	K	T	E	.	.	.	.	.	.	.	T	G	K	P	F	N	Q	A	A	Q	V	Y	N
Template Known Secondary structure									S	S		T	T	T	T	T	T	T	S											T																					T	S										.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.								.	.	.	.	70	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		H	S	L	F	W	K	G	L	K	K	G	T	T	.	.	L	Q	G	D	L	K	A	A	I	E	R	D	F	G	S	V	D	N	F	K	A	E	F	E	K	A	A	A	S	R	F	G	S	G	W	A	W	L	V	L	K	G	D	K	L	A	V	V	S	T	A	N	Q	D	S	P	L	M	G	E	A	I	S	G	A
Query Conservation															.	.
Alig confidence															.	.																																																												.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		H	T	F	F	F	N	N	L	A	P	N	G	G	G	E	P	T	G	K	I	A	E	L	I	T	R	D	F	G	S	F	E	K	F	K	E	D	F	S	A	A	A	V	G	H	F	G	S	G	W	V	W	L	I	A	D	D	G	K	L	K	I	V	Q	G	H	D	A	G	N	P	I	R	E	.	.	.	.	.	.
Template Known Secondary structure								T	B		T	T			S	S														S	S																	S	S									T	T									T	T			G	G	G	G	.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	F	P	I	M	G	L	D	V	W	E	H	A	Y	Y	L	K	F	Q	N	R	R	P	D	Y	I	K	E	F	W	N	V	V	N	W	D	E	A	A	A	R	F	A	A	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	T	P	L	M	N	I	D	V	W	E	H	A	Y	Y	I	D	Y	R	N	A	R	A	Q	Y	V	K	N	Y	W	N	L	V	N	W	D	F	V	N	D	N	V	A	K	A	G
Template Known Secondary structure		T										S	G	G	G	T					T	T										T	T	T	B													T
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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