Job Description P00448 Confidence 100.00% Date Thu Jan 5 10:56:37 GMT 2012 Rank 2 Aligned Residues 204 % Identity 70% Template c1y67D_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:manganese superoxide dismutase; PDBTitle: crystal structure of manganese superoxide dismutase from2 deinococcus radiodurans Resolution 1.85 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	T	L	P	S	L	P	Y	A	Y	D	A	L	E	P	H	F	D	K	Q	T	M	E	I	H	H	T	K	H	H	Q	T	Y	V	N	N	A	N	A	A	L	E	S	L	P	E	F	A	N	L	P	V	E	E	L	I	T	K	L	D	Q	L	P	A	D	K	K	T	V	L	R	N	N	A	G	G	H	A	N
Query Conservation
Alig confidence																																															.
Template Conservation																																															.
Template Sequence		A	Y	T	L	P	Q	L	P	Y	A	Y	D	A	L	E	P	H	I	D	A	R	T	M	E	I	H	H	T	K	H	H	Q	T	Y	V	D	N	A	N	K	A	L	E	G	T	.	E	F	A	D	L	P	V	E	Q	L	I	Q	Q	L	D	R	V	P	A	D	K	K	G	A	L	R	N	N	A	G	G	H	A	N
Template Known Secondary structure									S	S		T	T	T	T	T	T	T	S											T														T	T	S	.	T	T	T	T	S						T	T		T	T	T	S		G	G	G
Template Predicted Secondary structure																																															.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		82	.	.	.	.	.	.	.	90	.							.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.
Query Sequence		H	S	L	F	W	K	G	L	K	K	.	.	.	.	.	.	G	T	T	L	Q	G	D	L	K	A	A	I	E	R	D	F	G	S	V	D	N	F	K	A	E	F	E	K	A	A	A	S	R	F	G	S	G	W	A	W	L	V	L	K	G	D	K	L	A	V	V	S	T	A	N	Q	D	S	P	L	M	G	E	A
Query Conservation												.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.
Template Conservation
Template Sequence		H	S	M	F	W	Q	I	M	G	Q	G	Q	G	Q	N	G	A	N	Q	P	S	G	E	L	L	D	A	I	N	S	A	F	G	S	F	D	A	F	K	Q	K	F	E	D	A	A	K	T	R	F	G	S	G	W	A	W	L	V	V	K	D	G	K	L	D	V	V	S	T	A	N	Q	D	N	P	L	M	G	E	A
Template Known Secondary structure								T	B		S	S			B	T	T	B																S	S																	S	S									T	T									T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	G	A	S	G	F	P	I	M	G	L	D	V	W	E	H	A	Y	Y	L	K	F	Q	N	R	R	P	D	Y	I	K	E	F	W	N	V	V	N	W	D	E	A	A	A	R	F	A	A	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	G	V	S	G	T	P	I	L	G	V	D	V	W	E	H	A	Y	Y	L	N	Y	Q	N	R	R	P	D	Y	L	A	A	F	W	N	V	V	N	W	D	E	V	S	K	R	Y	A	A	A	K
Template Known Secondary structure				S	S		S									S	G	G	G	T					T	T										G	G	G	B													T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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