Job Description P00448 Confidence 100.00% Date Thu Jan 5 10:56:37 GMT 2012 Rank 27 Aligned Residues 187 % Identity 43% Template c1qnnD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:superoxide dismutase; PDBTitle: cambialistic superoxide dismutase from porphyromonas2 gingivalis Resolution 1.8 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	T	L	P	S	L	P	Y	A	Y	D	A	L	E	P	H	F	D	K	Q	T	M	E	I	H	H	T	K	H	H	Q	T	Y	V	N	N	A	N	A	A	L	E	S	L	P	E	F	A	N	L	P	V	E	E	L	I	T	K	L	D	Q	L	P	A	D	K	K	T	V	L	R	N	N	A	G	G	H	A	N
Query Conservation
Alig confidence																																															.															.	.	.	.	.	.	.
Template Conservation																																															.															.	.	.	.	.	.	.
Template Sequence		T	H	E	L	I	S	L	P	Y	A	V	D	A	L	A	P	V	I	S	K	E	T	V	E	F	H	H	G	K	H	L	K	T	Y	V	D	N	L	N	K	L	I	I	G	T	.	E	F	E	N	A	D	L	N	T	I	V	Q	K	S	.	.	.	.	.	.	.	E	G	G	I	F	N	N	A	G	Q	T	L	N
Template Known Secondary structure									S	S		T	T	T	T	T	T	T	T											T														T	T	S	.	T	T	T	T	S										.	.	.	.	.	.	.
Template Predicted Secondary structure																																															.															.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60								.	.	.	.	.	.	.	.	.	70	.	.	.
		82	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.																																														.
Query SS confidence												.	.																																														.
Query Sequence		H	S	L	F	W	K	G	L	K	K	.	.	G	T	T	L	Q	G	D	L	K	A	A	I	E	R	D	F	G	S	V	D	N	F	K	A	E	F	E	K	A	A	A	S	R	F	G	S	G	W	A	W	L	V	L	K	G	.	D	K	L	A	V	V	S	T	A	N	Q	D	S	P	L	M	G	E	A	I	S	G
Query Conservation												.	.																																														.
Alig confidence												.	.																																														.																		.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		H	N	L	Y	F	T	Q	F	R	P	G	K	G	G	A	P	K	G	K	L	G	E	A	I	D	K	Q	F	G	S	F	E	K	F	K	E	E	F	N	T	A	G	T	T	L	F	G	S	G	W	V	W	L	A	S	D	A	N	G	K	L	S	I	E	K	E	P	N	A	G	N	P	V	R	K	.	.	.	.	.
Template Known Secondary structure							T	T	B		T	T			S															S	S																	S	S									T	T										T	T			G	G	G	G	.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	G	F	P	I	M	G	L	D	V	W	E	H	A	Y	Y	L	K	F	Q	N	R	R	P	D	Y	I	K	E	F	W	N	V	V	N	W	D	E	A	A	A	R	F
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	G	L	N	P	L	L	G	F	D	V	W	E	H	A	Y	Y	L	T	Y	Q	N	R	R	A	D	H	L	K	D	L	W	S	I	V	D	W	D	I	V	E	S	R	Y
Template Known Secondary structure		.	T										S	G	G	G	T					T	T										G	G	G	B							T	T
Template Predicted Secondary structure		.
Template SS confidence
			149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions