Job Description P00448 Confidence 100.00% Date Thu Jan 5 10:56:37 GMT 2012 Rank 12 Aligned Residues 191 % Identity 43% Template c1ma1E_ PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:superoxide dismutase; PDBTitle: structure and properties of the atypical iron superoxide2 dismutase from methanobacterium thermoautotrophicum Resolution 2.60 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	T	L	P	S	L	P	Y	A	Y	D	A	L	E	P	H	F	D	K	Q	T	M	E	I	H	H	T	K	H	H	Q	T	Y	V	N	N	A	N	A	A	L	E	S	L	P	E	F	A	N	L	P	V	E	E	L	I	T	K	L	D	Q	L	P	A	D	K	K	T	V	L	R	N	N	A	G	G	H	A	N
Query Conservation
Alig confidence																																																														.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.
Template Sequence		F	Y	E	L	P	E	L	P	Y	P	Y	D	A	L	E	P	H	I	S	R	E	Q	L	T	I	H	H	Q	K	H	H	Q	A	Y	V	D	G	A	N	A	L	L	R	K	L	D	E	A	R	E	S	D	T	D	V	D	I	K	A	A	.	.	.	.	.	.	.	L	K	E	L	S	F	H	V	G	G	Y	V	L
Template Known Secondary structure									S	S		T	T	T	T	T	T	T	S											T																						T	T									.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.								.	.	.	70	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure												.	.	.	.																																														.	.
Query SS confidence												.	.	.	.																																														.	.
Query Sequence		H	S	L	F	W	K	G	L	K	K	.	.	.	.	G	T	T	L	Q	G	D	L	K	A	A	I	E	R	D	F	G	S	V	D	N	F	K	A	E	F	E	K	A	A	A	S	R	F	G	S	G	W	A	W	L	V	L	K	G	.	.	D	K	L	A	V	V	S	T	A	N	Q	D	S	P	L	M	G	E	A
Query Conservation												.	.	.	.																																														.	.
Alig confidence												.	.	.	.																																														.	.																		.	.
Template Conservation																																																																																.	.
Template Sequence		H	L	F	F	W	G	N	M	G	P	A	D	E	C	G	G	E	P	S	G	K	L	A	E	Y	I	E	K	D	F	G	S	F	E	R	F	R	K	E	F	S	Q	A	A	I	S	A	E	G	S	G	W	A	V	L	T	Y	C	Q	R	T	D	R	L	F	I	M	Q	V	E	K	H	N	V	N	V	I	P	.	.
Template Known Secondary structure								T	B			T	T	T	S		S															S	S														T		S	S	S									T	T	T	T									T	T	T	B	S			T	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	G	A	S	G	F	P	I	M	G	L	D	V	W	E	H	A	Y	Y	L	K	F	Q	N	R	R	P	D	Y	I	K	E	F	W	N	V	V	N	W	D	E	A	A	A	R	F	A	A	K
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	H	F	R	I	L	L	V	L	D	V	W	E	H	A	Y	Y	I	D	Y	R	N	V	R	P	D	Y	V	E	A	F	W	N	I	V	N	W	K	E	V	E	K	R	F	E	D	I
Template Known Secondary structure		.	.	.	.	T				S						S	G	G	G	T					T	T										T	T	T	B											T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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