Job Description P00448 Confidence 100.00% Date Thu Jan 5 10:56:37 GMT 2012 Rank 3 Aligned Residues 199 % Identity 52% Template c1gv3B_ PDB info PDB header:manganese superoxide dismutase Chain: B: PDB Molecule:manganese superoxide dismutase; PDBTitle: the 2.0 angstrom resolution structure of the catalytic2 portion of a cyanobacterial membrane-bound manganese3 superoxide dismutase Resolution 2.0 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	Y	T	L	P	S	L	P	Y	A	Y	D	A	L	E	P	H	F	D	K	Q	T	M	E	I	H	H	T	K	H	H	Q	T	Y	V	N	N	A	N	A	A	L	E	S	L	P	E	F	A	N	L	P	V	E	E	L	I	T	K	L	D	Q	L	P	A	D	K	K	T	V	L	R	N	N	A	G	G	H	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	P	A	E	L	P	P	L	P	Y	G	Y	D	A	L	E	K	A	I	D	A	E	T	M	K	L	H	H	D	K	H	H	A	A	Y	V	N	N	L	N	N	A	L	K	K	H	P	E	L	Q	N	S	S	V	E	A	L	L	R	D	L	N	S	V	P	E	D	I	R	T	T	V	R	N	N	G	G	G	H	L
Template Known Secondary structure		T	T							S	S		T	T	T	T	T	T	T	S											T															T		G	G	G	T	T	S								T	G	G	G	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																.	.																																											.
Query SS confidence																.	.																																											.
Query Sequence		N	H	S	L	F	W	K	G	L	K	K	G	T	T	.	.	L	Q	G	D	L	K	A	A	I	E	R	D	F	G	S	V	D	N	F	K	A	E	F	E	K	A	A	A	S	R	F	G	S	G	W	A	W	L	V	L	K	G	.	D	K	L	A	V	V	S	T	A	N	Q	D	S	P	L	M	G	E	A	I	S
Query Conservation																.	.																																											.
Alig confidence																.	.																																											.																		.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		N	H	T	I	F	W	Q	I	M	S	P	D	G	G	G	Q	P	T	G	D	I	A	Q	E	I	N	Q	T	F	G	S	F	E	E	F	K	K	Q	F	N	Q	A	G	G	D	R	F	G	S	G	W	V	W	L	V	R	N	P	Q	G	Q	L	Q	V	V	S	T	P	N	Q	D	N	P	I	M	E	.	.	.	.
Template Known Secondary structure									T	B		T	T			S	S														S	S																	S	S									T	T	S									T	T			G	G	G	G	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	S	G	F	P	I	M	G	L	D	V	W	E	H	A	Y	Y	L	K	F	Q	N	R	R	P	D	Y	I	K	E	F	W	N	V	V	N	W	D	E	A	A	A	R	F	A	A	K
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	G	S	Y	P	I	M	G	N	D	V	W	E	H	A	Y	Y	L	R	Y	Q	N	R	R	P	E	Y	L	N	N	W	W	N	V	V	N	W	S	E	I	N	R	R	T	Q	A	S
Template Known Secondary structure		.	.	T										S	G	G	G	T					T	T										G	G	G	B
Template Predicted Secondary structure		.	.
Template SS confidence
				192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions