Job Description P00448 Confidence 100.00% Date Thu Jan 5 10:56:37 GMT 2012 Rank 30 Aligned Residues 187 % Identity 29% Template c1cojA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:protein (superoxide dismutase); PDBTitle: fe-sod from aquifex pyrophilus, a hyperthermophilic bacterium Resolution 1.90 Å

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		11	.	.	.	.	.	.	.					.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.
Query SS confidence										.	.	.	.
Query Sequence		A	Y	D	A	L	E	P	H	.	.	.	.	F	D	K	Q	T	M	E	I	H	H	T	K	H	H	Q	T	Y	V	N	N	A	N	A	A	L	E	S	L	P	E	F	A	N	L	P	V	E	E	L	I	T	K	L	D	Q	L	P	A	D	K	K	T	V	L	R	N	N	A	G	G	H	A	N	H	S	L	F	W
Query Conservation										.	.	.	.
Alig confidence										.	.	.	.																															.
Template Conservation																																												.
Template Sequence		P	K	D	H	L	K	P	Q	N	L	E	G	I	S	N	E	Q	I	E	P	H	F	E	A	H	Y	K	G	Y	V	A	K	Y	N	E	I	Q	E	K	L	A	D	.	Q	N	F	A	D	R	S	K	A	N	Q	N	Y	S	E	Y	R	E	L	K	V	E	E	T	F	N	Y	M	G	V	V	L	H	E	L	Y	F
Template Known Secondary structure				G	G	G				S		S	S	S											T																			.	T	T	T	T		G	G	G			S	S	S
Template Predicted Secondary structure																																												.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		87	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure								.	.																																													.	.
Query SS confidence								.	.																																													.	.
Query Sequence		K	G	L	K	K	G	.	.	T	T	L	Q	G	D	L	K	A	A	I	E	R	D	F	G	S	V	D	N	F	K	A	E	F	E	K	A	A	A	S	R	F	G	S	G	W	A	W	L	V	L	K	G	.	.	D	K	L	A	V	V	S	T	A	N	Q	D	S	P	L	M	G	E	A	I	S	G	A	S	G	F
Query Conservation								.	.																																													.	.
Alig confidence								.	.																															.	.													.	.																		.	.	.	.	.	.
Template Conservation																																								.	.																																.	.	.	.	.	.
Template Sequence		G	M	L	T	P	G	G	K	G	E	P	S	E	A	L	K	K	K	I	E	E	D	I	G	G	L	D	A	C	T	N	E	L	K	A	A	A	M	.	.	A	F	R	G	W	A	I	L	G	L	D	I	F	S	G	R	L	V	V	N	G	L	D	A	H	N	V	Y	N	L	T	.	.	.	.	.	.	G	L	I
Template Known Secondary structure		T	T	B		T	T		B	S														T	S															.	.			S	S								T	T	T	T								S	B	T	T	B	S			T	.	.	.	.	.	.	T
Template Predicted Secondary structure																																								.	.																																.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.							.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	M	G	L	D	V	W	E	H	A	Y	Y	L	K	F	Q	N	R	R	P	D	Y	I	K	E	F	W	N	V	V	N	W	D	E	A	A	A	R	F	A	A	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	L	I	V	I	D	T	Y	E	H	A	Y	Y	V	D	Y	K	N	K	R	P	P	Y	I	D	A	F	F	K	N	I	N	W	D	V	V	N	E	R	F	E	K	A	M
Template Known Secondary structure									S	G	G	G	T					T	T												T	B	B
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions