Job Description Q9S4X5 Confidence 20.35% Date Thu Jan 5 12:38:29 GMT 2012 Rank 9 Aligned Residues 45 % Identity 13% Template c2ca9B_ PDB info PDB header:transcriptional regulation Chain: B: PDB Molecule:putative nickel-responsive regulator; PDBTitle: apo-nikr from helicobacter pylori in closed trans-2 conformation Resolution 2.05 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.													.	.	50	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	M	Y	F	S	G	E	P	A	Q	I	A	E	I	K	R	L	A	S	G	A	V	T	P	L	Y	R	R	A	T	N	E	G	I	Q	L	F	L	A	G	.	.	.	.	.	.	.	.	.	.	.	.	S	A	G	L	L
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	F	S	V	S	L	Q	Q	N	L	L	D	E	L	D	N	R	I	I	K	N	G	Y	S	S	R	S	E	L	V	R	D	M	I	R	E	K	L	V	E	D	N	W	A	E	D	N	P	N	D	E	S	K	I	A	V	L
Template Known Secondary structure																	T	T	T	G	G	G	T		S	S																							T	T
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions