Return to main results Retrieve Phyre Job Id

Job DescriptionP33030
Confidence97.41%DateThu Jan 5 11:51:08 GMT 2012
Rank98Aligned Residues138
% Identity17%Templatec3tr5C_
PDB info PDB header:translationChain: C: PDB Molecule:peptide chain release factor 3; PDBTitle: structure of a peptide chain release factor 3 (prfc) from coxiella2 burnetii
Resolution2.11 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50 .........60.........70.........80.....
Predicted Secondary structure 


















.















Query SS confidence 











































.


































Query Sequence  ITGFLGSGKTTSILHLLAHKDPNEKWAVLVNEFGEVGIDGALLA. DSGALLKEIPGGCMCCVNGLPMQVGLNTLLRQGKP
Query Conservation 












  

         


 

 
   

  

 .     
 

  




     
   
  
      
Alig confidence 



















..





















.










.....................


Template Conservation 





 




 
 

  
..
 
   
 
  
 
  
    
     

     .....................   
Template Sequence  IISHPDAGKTTLTEKLLLFG. . GAIQLAGTIKSRHATSDWXELEKQVTTSVXQFPY. . . . . . . . . . . . . . . . . . . . . KDY
Template Known Secondary structure 

TTSS..T
T



TT


SS.....................TT
Template Predicted Secondary structure 






..






















.....................

Template SS confidence 















































































   15....20.........30.... .....40.........50.........60........ .70.
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  DRLLIEPTGLGHPKQILDLLTAPVYEPWIDLRATLCILDPRLLLDEKSASNENFRDQLAAADIIVANKSDRTTPESEQAL
Query Conservation 
 



 

 
 
  
   
          
  

 



                

  

 




 
      
   
Alig confidence 











.......




























































Template Conservation   








 
.......
  

  

   
 






  

  

            
 








  
      
Template Sequence  LINLLDTPGHAD. . . . . . . FTEDTYRTLTAVDSALXVIDAAKGVEPRTIKLXEVCRLRHTPIXTFINKXDRDTRPSIELL
Template Known Secondary structure 



STT.......

GGG
STTTBS
TTT


TTS



Template Predicted Secondary structure 


.......




















Template SS confidence 















































































   80.........90. ........100.........110.........120.........130.........140.........150..
 
   166...170....
Predicted Secondary structure 

Query SS confidence 








Query Sequence  QRWWQQNGG
Query Conservation     
  


Alig confidence 








Template Conservation    
   
  
Template Sequence  DEIESILRI
Template Known Secondary structure  S

Template Predicted Secondary structure 

Template SS confidence 








   153......160.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions