Job Description P33030 Confidence 98.00% Date Thu Jan 5 11:51:08 GMT 2012 Rank 48 Aligned Residues 127 % Identity 19% Template c3t5dC_ PDB info PDB header:signaling protein Chain: C: PDB Molecule:septin-7; PDBTitle: crystal structure of septin 7 in complex with gdp Resolution 3.30 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	T	G	F	L	G	S	G	K	T	T	S	I	L	H	L	L	A	H	K	D	P	N	E	K	W	A	V	L	V	N	E	F	G	E	V	G	I	D	G	A	L	L	A	D	S	G	A	L	L	K	E	I	P	G	G	C	M	C	C	V	N	G	L	P	M	Q	V	G	L	N	T	L	L	R	Q	G	K	P
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Template Sequence		M	V	V	G	E	S	G	L	G	K	S	T	L	I	N	S	L	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	D	L	I	K	K	T	V	Q	V	E	Q	S	K	V	L	I	.	.	.	.	.	.	.	.	.	.	K	E	V	Q	L
Template Known Secondary structure							T	T	S	S									S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S					S												.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.																														.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70											.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.								.	.	100	.	.	.	.	.	.	.	.	.	110														.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	R	L	L	I	E	P	T	G	L	G	H	.	.	.	.	.	.	.	P	K	Q	I	L	D	L	L	T	A	P	V	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	W	I	D	L	R	A	T	L	C	I	L	D	P	R	L	L	L	D	E	K	S	A	S	N	E	N	F	R	D	Q	L	A	A
Query Conservation														.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	T	I	V	D	T	P	G	F	G	D	A	V	D	N	S	N	C	W	Q	P	V	I	D	Y	I	D	S	K	F	E	D	Y	L	N	A	E	S	R	V	N	R	R	Q	M	P	D	N	R	V	Q	C	C	L	Y	F	I	A	P	S	G	H	G	L	K	P	L	D	I	E	F	M	K	R	L	H	E	K	V
Template Known Secondary structure												S			S			T	T	T	T																				S	S				S															S			S	S													T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	I	I	V	A	N	K	S	D	R	T	T	P	E	S	E	Q	A	L	Q	R	W	W	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	I	I	P	L	I	A	K	A	D	T	L	T	P	E	E	C	Q	Q	F	K	K	Q	I	M	K
Template Known Secondary structure								S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions