Job Description P33030 Confidence 99.10% Date Thu Jan 5 11:51:08 GMT 2012 Rank 11 Aligned Residues 152 % Identity 22% Template c3md0A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:arginine/ornithine transport system atpase; PDBTitle: crystal structure of arginine/ornithine transport system2 atpase from mycobacterium tuberculosis bound to gdp (a ras-3 like gtpase superfamily protein) Resolution 2.45 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		R	T	N	L	I	T	G	F	L	G	S	G	K	T	T	S	I	L	H	L	L	A	H	.	K	D	P	N	E	K	W	A	V	L	V	N	E	F	G	E	V	G	I	D	G	A	L	L	A	D	S	G	A	L	L	K	E	I	P	G	G	C	M	C	C	V	N	G	L	P	M	Q	V	G	L	N	T	L	L	R
Query Conservation																									.
Alig confidence																									.															.	.	.	.	.	.																													.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.																													.	.	.	.	.
Template Sequence		H	R	V	G	I	T	G	V	P	G	V	G	K	S	T	A	I	E	A	L	G	M	H	L	I	E	R	G	H	R	V	A	V	L	A	V	R	M	.	.	.	.	.	.	A	R	L	A	V	H	P	N	A	Y	I	R	P	S	T	L	G	G	V	T	R	A	T	R	E	T	V	V	.	.	.	.	.	L	L	E
Template Known Secondary structure										T	T	S	S														T	T	T											.	.	.	.	.	.					T	S	T	T																					.	.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.	.	.																													.	.	.	.	.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.							.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.						.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	K	P	D	R	L	L	I	E	P	T	G	L	G	H	P	K	Q	I	L	D	L	L	T	A	P	V	Y	E	P	W	I	D	L	R	A	T	L	C	I	L	D	P	R	L	L	L	D	E	K	S	A	S	N	E	N	F	R	D	Q	L	A	A	A	D	I	I	V	A	N	K	S	D	R	T	T	P	E	S
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.
Template Sequence		A	A	G	F	D	V	I	L	I	E	T	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	V	A	V	A	N	M	V	D	T	F	V	L	L	T	L	A	R	T	G	D	Q	L	Q	G	I	K	K	G	V	L	.	.	.	.	E	L	A	D	I	V	V	V	N	K	A	D	G	E	H	H	K	E
Template Known Secondary structure			T	T											.	.	.	.	.	.	.	.	.	.	.	.	.							T	T		S								S		T	T	T	T	T	T	T			T	T	G	G	.	.	.	.	G	G		S									G	G	G
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160														.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.					.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		162	.	.	.	.	.	.	.	170	.	.										.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.
Query Sequence		E	Q	A	L	Q	R	W	W	Q	Q	N	.	.	.	.	.	.	.	.	.	G	G	D	R	Q	L	I	H	S	E
Query Conservation													.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	R	L	A	A	R	E	L	S	A	A	I	R	L	I	Y	P	R	E	A	L	W	R	P	P	V	L	T	M	S
Template Known Secondary structure																	S	T	T		S	S									B
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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