Job Description P33030 Confidence 97.74% Date Thu Jan 5 11:51:08 GMT 2012 Rank 64 Aligned Residues 131 % Identity 18% Template c3lx8A_ PDB info PDB header:metal transport Chain: A: PDB Molecule:ferrous iron uptake transporter protein b; PDBTitle: crystal structure of gdp-bound nfeob from s. thermophilus Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	R	T	N	L	I	T	G	F	L	G	S	G	K	T	T	S	I	L	H	L	L	A	H	K	D	P	N	E	K	W	A	V	L	V	N	E	F	G	E	V	G	I	D	G	A	L	L	A	D	S	G	A	L	L	K	E	I	P	G	G	C	M	C	C	V	N	G	L	P	M	Q	V	G	L	N	T	L	L
Query Conservation
Alig confidence						.																			.	.	.	.	.						.							.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.																			.	.	.	.	.						.							.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	T	E	I	.	A	L	I	G	N	P	N	S	G	K	T	S	L	F	N	L	I	T	.	.	.	.	.	G	H	N	Q	R	.	V	G	N	W	P	G	.	.	.	.	.	.	.	.	.	V	T	V	E	R	K	S	G	L	V	K	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						.					S	T	T	S	S										.	.	.	.	.	T	T				.					T	T	.	.	.	.	.	.	.	.	.	S	S	S								S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.																			.	.	.	.	.						.							.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.		.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.						.	.	.	.	.		.	.	30	.	.	.										.	.	.	.	.	.	40	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		R	Q	G	K	P	D	R	L	L	I	E	P	T	G	L	G	H	P	K	Q	I	L	D	L	.	L	T	A	P	V	Y	E	P	W	I	D	L	R	A	T	L	C	I	L	D	P	R	L	L	L	D	E	K	S	A	S	N	E	N	F	R	D	Q	L	A	A	A	D	I	I	V	A	N	K	S	D	R	T	T	P
Query Conservation																										.
Alig confidence		.	.	.	.																					.																																										.	.
Template Conservation		.	.	.	.																																																															.	.
Template Sequence		.	.	.	.	K	D	L	E	I	Q	D	L	P	G	I	Y	S	M	S	P	Y	S	P	E	E	K	V	A	R	D	Y	L	L	S	Q	R	A	D	S	I	L	N	V	V	D	A	T	N	L	E	R	N	L	Y	L	T	T	Q	L	I	E	T	G	I	P	V	.	.	T	I	A	L	N	M	I	D	V	L	D	G
Template Known Secondary structure		.	.	.	.	T	T										S	S			S	S	S												T	T			S								S	T	T													T	T	S	S			.	.
Template Predicted Secondary structure		.	.	.	.																																																															.	.
Template SS confidence
						47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120
		160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	E	Q	A	L	Q	R	W	W	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	G	K	K	I	N	V	D	K	L	S	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions