Job Description P33030 Confidence 97.59% Date Thu Jan 5 11:51:08 GMT 2012 Rank 79 Aligned Residues 143 % Identity 16% Template c3ievA_ PDB info PDB header:nucleotide binding protein/rna Chain: A: PDB Molecule:gtp-binding protein era; PDBTitle: crystal structure of era in complex with mggnp and the 3' end of 16s2 rrna Resolution 1.90 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	T	G	F	L	G	S	G	K	T	T	S	I	L	H	L	L	A	H	K	D	P	N	E	K	W	A	V	L	V	N	E	F	G	E	V	G	I	D	G	A	L	L	A	D	S	G	A	L	L	K	E	I	P	G	G	C	M	C	C	V	N	G	L	P	M	Q	V	G	L	N	T	L	L	R	Q	G	K	P
Query Conservation
Alig confidence																				.	.	.	.	.																.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.																.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	I	V	G	K	P	N	V	G	K	S	T	L	L	N	N	L	L	.	.	.	.	.	G	T	K	V	S	I	I	S	P	K	A	G	T	T	R	.	.	.	.	.	.	.	M	R	V	L	G	V	K	N	I	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A
Template Known Secondary structure						S	T	T	S	S										.	.	.	.	.	T	S			S				S	S	S					.	.	.	.	.	.	.	S									T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																				.	.	.	.	.																.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.						.	.	.	.	.	30	.	.	.	.	.	.	.	.	.								40	.	.	.	.	.	.	.	.	.	50																							.	.
		86	.	.	.	90	.	.	.	.	.				.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure												.	.	.																																																					.
Query SS confidence												.	.	.																																																					.
Query Sequence		D	R	L	L	I	E	P	T	G	L	.	.	.	G	H	P	K	Q	I	L	D	L	L	T	A	P	V	Y	E	P	W	I	D	L	R	A	T	L	C	I	L	D	P	R	L	L	L	D	E	K	S	A	S	N	E	N	F	R	D	Q	L	A	A	A	D	.	I	I	V	A	N	K	S	D	R	T	T	P	E	S
Query Conservation												.	.	.																																																					.
Alig confidence												.	.	.																																																					.
Template Conservation
Template Sequence		Q	I	I	F	L	D	T	P	G	I	Y	E	P	K	K	S	D	V	L	G	H	S	M	V	E	I	A	K	Q	S	L	E	E	A	D	V	I	L	F	M	I	D	A	T	E	G	W	R	P	R	D	E	E	I	Y	Q	N	F	I	K	P	L	N	K	P	V	I	V	V	I	N	K	I	D	K	I	G	P	A	K
Template Known Secondary structure																T	T																			S								T	T	T	B	S												T	G	G	G											G	G	G	S	S	S	G	G
Template Predicted Secondary structure
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
				162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	E	Q	A	L	Q	R	W	W	Q	Q	N	G	G	D	R	Q	L	I	H	S	E
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		N	V	L	P	L	I	D	E	I	H	K	K	H	P	E	L	T	E	I	V	P	I	S
Template Known Secondary structure		G	G												T	T								B
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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