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Job DescriptionP33030
Confidence94.58%DateThu Jan 5 11:51:08 GMT 2012
Rank326Aligned Residues184
% Identity14%Templatec3ibgF_
PDB info PDB header:hydrolaseChain: F: PDB Molecule:atpase, subunit of the get complex; PDBTitle: crystal structure of aspergillus fumigatus get3 with bound2 adp
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20..... ....30.........40.........50.........60..
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Query Sequence  RTNLITGFLGSGKTTSILHLLAH. KDPNEKWAVLVNEFGEVGIDGALLADSGALLKEIPGG. . . . . . . . . . . . . . . . . . .
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Template Sequence  RWIFVGGKGGVGKTTTSCSLAIQLAKVRKSVLLISTDP. AHNLSDAFGQKFGKEARLVDGYSNLSAMEIDPNGSIQDLLA
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SSSSTTSS


T.T
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T
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   27..30.........40.........50.........60.... .....70.........80.........90.........100.....
 
   63......70.........80.........90.......
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Query Sequence  . . . . . . CMCCVNGLPMQVGLNTLLRQGKPDRLLIEPTGLGH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  SQDLAFSIPGVDEAMSFAEVLKQVKSLSYEVIVFDTAPTGHTLRFLQFPTVLEKALAKLSQLSSQFSILGARGGLPGGQN
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TTS
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SSTTTTGGGGT

TTGGGGS
TT


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   106...110.........120.........130.........140.........150.........160.........170.........180.....
 
   98.100.........110.........120.........130.........140.........150.........160..
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Query Sequence  . . . . . . . . . . PKQILDLLTAPVYEPWIDLRATLCILDPRLLLDEKSASNENFRDQLAAADIIVANKSDRTTPESE. . . . .
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Template Sequence  IDELLQKMESLRETISEVNTQFKNPDMTTFVCVCIAEFLSLYETERMIQELTSYGIDT. HAIVVNQLLFPGCEQCNARRK
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TTTSST

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   209210.........220.........230.........240.........250.........260...... ...270.........280.......
 
   163......170.........180........
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Query Sequence  . . QALQRWWQQNGGDRQLIHSEHGKVDG
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Template Sequence  MQKKYLEQIEELYEDFNVVRMPLLVEEV
Template Known Secondary structure  TTTS

SS
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   292.......300.........310.........
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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