Job Description P33030 Confidence 99.10% Date Thu Jan 5 11:51:08 GMT 2012 Rank 12 Aligned Residues 141 % Identity 19% Template c3dmdA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus Resolution 2.21 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.																								.	.	.
Query SS confidence																									.																								.	.	.
Query Sequence		R	T	N	L	I	T	G	F	L	G	S	G	K	T	T	S	I	L	H	L	L	A	H	.	K	D	P	N	E	K	W	A	V	L	V	N	E	F	G	E	V	G	I	D	G	A	L	.	.	.	L	A	D	S	G	A	L	L	K	E	I	P	G	G	C	M	C	C	V	N	G	L	P	M	Q	V	G	L	N	T
Query Conservation																									.																								.	.	.
Alig confidence																									.																								.	.	.															.	.	.
Template Conservation																																																																		.	.	.
Template Sequence		Y	V	I	M	F	V	G	F	N	G	S	G	K	T	T	T	I	A	K	L	A	N	W	L	K	N	H	G	F	S	V	V	I	A	A	S	D	T	F	R	A	G	A	I	E	Q	L	E	E	H	A	K	R	I	G	V	K	V	I	K	H	S	Y	G	.	.	.	A	D	P	A	A	V	A	Y	D	A	I	Q	H
Template Known Secondary structure										T	T	S	S															T	T										T	T															T	T							S	T	T	.	.	.
Template Predicted Secondary structure																																																																		.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.									.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																		.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.
Query Sequence		L	L	R	Q	G	K	P	D	R	L	L	I	E	P	T	G	.	.	.	.	.	.	.	.	L	G	H	P	K	Q	I	L	D	L	L	T	A	P	V	Y	E	P	W	I	D	L	R	A	T	L	C	I	L	D	P	R	L	L	L	D	E	K	S	A	S	N	E	N	F	R	D	Q	L	A	A	A	D	I	I	V
Query Conservation																		.	.	.	.	.	.	.	.
Alig confidence						.												.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.																						.	.
Template Conservation						.																																			.	.	.	.	.	.	.	.	.																						.	.
Template Sequence		A	K	A	R	.	G	I	D	V	V	L	I	D	T	A	G	R	S	E	T	N	R	N	L	M	D	E	M	K	K	I	A	R	V	T	K	P	N	L	.	.	.	.	.	.	.	.	.	V	I	F	V	G	D	A	L	A	G	N	A	I	V	E	Q	A	R	Q	F	N	.	.	E	A	V	K	I	D	G	I	I
Template Known Secondary structure						.	T		S								S	S			S	S	S																S		.	.	.	.	.	.	.	.	.							T	T		T	T	T										.	.			S
Template Predicted Secondary structure						.																																			.	.	.	.	.	.	.	.	.																						.	.
Template SS confidence
		201	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.										.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.			260	.	.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	K	S	D	R	T	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	K	L	D	A	D	A
Template Known Secondary structure				S	G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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