Job Description P33030 Confidence 98.85% Date Thu Jan 5 11:51:08 GMT 2012 Rank 20 Aligned Residues 123 % Identity 20% Template c2wwwB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:methylmalonic aciduria type a protein, PDBTitle: crystal structure of methylmalonic acidemia type a protein Resolution 2.64 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		R	T	N	L	I	T	G	F	L	G	S	G	K	T	T	S	I	L	H	L	L	A	H	.	K	D	P	N	E	K	W	A	V	L	V	N	E	F	G	E	V	G	I	D	G	A	L	L	A	D	S	G	A	L	L	K	E	I	P	G	G	C	M	C	C	V	N	G	L	P	M	Q	V	G	L	N	T	L	L	R
Query Conservation																									.
Alig confidence																									.																			.	.	.	.	.	.	.	.	.											.	.	.	.	.							.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.											.	.	.	.	.							.	.	.	.
Template Sequence		F	R	V	G	L	S	G	P	P	G	A	G	K	S	T	F	I	E	Y	F	G	K	M	L	T	E	R	G	H	K	L	S	V	L	A	V	D	T	E	L	S	R	.	.	.	.	.	.	.	.	.	D	M	N	A	Y	I	R	P	T	R	.	.	.	.	.	T	T	N	E	A	I	.	.	.	.	L	L	C	E
Template Known Secondary structure										T	T	S	S															T	T												S	S	S	.	.	.	.	.	.	.	.	.		T	T							T	.	.	.	.	.	T						.	.	.	.
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.											.	.	.	.	.							.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.										.	.	.	.	190	.	.	.	.	.						.	.	.	.	200	.					.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	K	P	D	R	L	L	I	E	P	T	G	L	G	H	P	K	Q	I	L	D	L	L	T	A	P	V	Y	E	P	W	I	D	L	R	A	T	L	C	I	L	D	P	R	L	L	L	D	E	K	S	A	S	N	E	N	F	R	D	Q	L	A	A	A	D	I	I	V	A	N	K	S	D	R	T	T	P	E	S
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	G	Y	D	I	I	L	I	E	T	V	G	Q	S	E	F	A	V	A	D	M	V	.	.	.	.	.	.	.	.	.	.	.	.	D	M	F	V	L	L	L	P	P	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	M	A	D	L	V	A	V	T	K	S	D	G	D	L	I	V	P
Template Known Secondary structure			T	T		S																T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S		S								S	T	T	S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.													.	.	.	.	260	.	.	.	.	.																	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		162	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	A	L	Q	R	W	W	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	R	I	Q	A	E	Y	V	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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