Return to main results Retrieve Phyre Job Id

Job DescriptionP33030
Confidence94.98%DateThu Jan 5 11:51:08 GMT 2012
Rank291Aligned Residues88
% Identity22%Templatec2qz4A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:paraplegin; PDBTitle: human paraplegin, aaa domain in complex with adp
Resolution2.22 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80. .
Predicted Secondary structure 































...
Query SS confidence 











































































. . .
Query Sequence  LITGFLGSGKTTSILHLLAHKDPNEKWAVLVNEFGEVGIDGALLADSGALLKEIPGGCMCCVNGLPMQVGLNTLLR. . . Q
Query Conservation 













  

         


 

 
   

  

      
 

  




     
   
  
  ... 
Alig confidence 






















..........................


























...
Template Conservation 

 

 




 

  

     ..........................                     
         
Template Sequence  LLLGPPGCGKTLLAKAVATEAQV. . . . . . . . . . . . . . . . . . . . . . . . . . PFLAMAGAEFVEVIGGLGAARVRSLFKEARA
Template Known Secondary structure  S
TTSST
..........................
TTTTSSSSTT
Template Predicted Secondary structure 








..........................





Template SS confidence 















































































   346...350.........360........ .370.........380.........390.........
 
   83......90.........100.........110.........
Predicted Secondary structure 


















Query SS confidence 




































Query Sequence  GKPDRLLIEPTGLGHPKQILDLLTAPVYEPWIDLRAT
Query Conservation     
 



 

 
 
  
   
          
  
Alig confidence 




































Template Conservation      

  
                     
  
  
Template Sequence  RAPCIVYIDEIEQTLNQLLVEMDGMGTTDHVIVLAST
Template Known Secondary structure  T
S


T

TT

Template Predicted Secondary structure 




















Template SS confidence 




































   400.........410.........420.........430......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions