Job Description P33030 Confidence 95.52% Date Thu Jan 5 11:51:08 GMT 2012 Rank 245 Aligned Residues 164 % Identity 15% Template c2qmoA_ PDB info PDB header:ligase Chain: A: PDB Molecule:dethiobiotin synthetase; PDBTitle: crystal structure of dethiobiotin synthetase (biod) from helicobacter2 pylori Resolution 1.47 Å

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		3	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.									.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure										.																.														.	.	.	.	.	.	.	.											.																				.	.	.	.
Query SS confidence										.																.														.	.	.	.	.	.	.	.											.																				.	.	.	.
Query Sequence		R	T	N	L	I	T	G	F	.	L	G	S	G	K	T	T	S	I	L	H	L	L	A	H	.	K	D	P	N	E	K	W	A	V	L	V	N	E	.	.	.	.	.	.	.	.	F	G	E	V	G	I	D	G	A	L	.	L	A	D	S	G	A	L	L	K	E	I	P	G	G	C	M	C	C	V	.	.	.	.
Query Conservation										.																.														.	.	.	.	.	.	.	.											.																				.	.	.	.
Alig confidence										.																.														.	.	.	.	.	.	.	.											.																				.	.	.	.
Template Conservation
Template Sequence		H	X	L	F	I	S	A	T	N	T	N	A	G	K	T	T	C	A	R	L	L	A	Q	Y	C	N	A	C	G	V	K	T	I	L	L	K	P	I	E	T	G	V	N	D	A	I	N	H	S	S	D	A	H	L	F	L	Q	D	N	R	L	L	D	R	S	L	T	L	K	D	I	S	F	Y	R	Y	H	K	V	S
Template Known Secondary structure									S	S	T	T	S																T	T												S			T	T	T				S										T	T	T		T	T												S	S		S
Template Predicted Secondary structure
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
																	68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.									.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	L	P	M	Q	V	G	L	N	T	L	L	R	Q	G	K	P	D	R	L	L	I	E	P	T	G	L	G	.	.	.	.	.	.	.	.	H	P	K	Q	I	L	D	L	L	T	A	P	V	Y	E	P	W	I	D	L	R	A	T	L	C	I	L	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.												.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.																																.	.	.	.	.	.	.	.	.	.
Template Sequence		A	P	L	I	A	Q	Q	E	E	D	P	N	A	P	I	D	T	D	N	L	T	Q	R	L	H	N	F	T	K	T	Y	.	.	D	L	V	I	V	E	G	A	G	G	L	C	V	P	I	T	L	E	E	N	X	L	D	F	A	L	K	L	K	A	K	.	.	.	.	.	.	.	.	.	.	X	L	L	I	S	H
Template Known Secondary structure												T	T															G	G	G	T		.	.	S							S	S		T	T		B	S	S	S	S		B									T			.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.																																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.											.	.	.	.	.	.
		125	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		P	R	.	.	L	L	L	D	E	K	S	A	S	N	E	N	F	R	D	Q	L	A	A	A	D	I	I	V	A	N	K	S	D	R	T	T	P	E	S	E	Q	A	L	Q	R	W	W	Q	Q	N	G	G	D	R	Q	L	I
Query Conservation				.	.
Alig confidence				.	.																																																.
Template Conservation																																																					.
Template Sequence		D	N	L	G	L	I	N	D	C	L	L	N	D	F	L	L	K	S	H	Q	L	D	Y	K	I	A	I	N	L	K	G	N	N	T	A	F	H	S	I	S	L	P	Y	I	E	L	F	N	T	R	S	.	N	N	P	I	V
Template Known Secondary structure			S	T	T														T	S	S	S										T	T		S	S					T												.	S	S
Template Predicted Secondary structure																																																					.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions