Job Description P33030 Confidence 98.23% Date Thu Jan 5 11:51:08 GMT 2012 Rank 40 Aligned Residues 140 % Identity 19% Template c1wb1C_ PDB info PDB header:protein synthesis Chain: C: PDB Molecule:translation elongation factor selb; PDBTitle: crystal structure of translation elongation factor selb2 from methanococcus maripaludis in complex with gdp Resolution 3.0 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	G	F	L	G	S	G	K	T	T	S	I	L	H	L	L	A	H	K	D	P	N	E	K	W	A	V	L	V	N	E	F	G	E	V	G	I	D	G	A	L	L	A	D	S	G	A	L	L	K	E	I	P	G	G	C	M	C	C	V	N	G	L	P	M	Q	V	G	L	N	T	L	L	R	Q	G	K	P	D
Query Conservation
Alig confidence																										.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	F	G	H	I	D	H	G	K	T	T	L	S	K	V	L	T	E	I	A	S	T	S	A	.	.	.	.	.	.	H	D	K	L	P	E	S	Q	K	R	G	I	T	I	D	I	G	F	S	A	F	K	L	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	R
Template Known Secondary structure						T	T	S	S	T	T							T	T	T	S	S		S	S	.	.	.	.	.	.		S	S	S	S	T	T	T	T	S						S	S							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.							.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.																								.	60
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	L	I	E	P	T	G	L	G	H	P	K	Q	I	L	D	L	L	T	A	P	V	Y	E	P	W	I	D	L	R	A	T	L	C	I	L	D	P	R	L	L	L	D	E	K	S	A	S	N	E	N	F	R	D	Q	L	A	A	A	D	I	I	V	A	N	K	S	D	R	T	T	P	E	S	E	Q	A	L	Q
Query Conservation
Alig confidence																		.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.
Template Sequence		I	T	L	V	D	A	P	G	H	A	D	L	I	R	A	V	.	.	.	.	.	.	.	V	S	A	A	D	I	I	D	L	A	L	I	V	V	D	A	K	E	G	P	K	T	Q	T	G	E	H	M	L	I	L	D	H	F	N	I	P	I	I	V	V	I	T	K	S	D	N	A	G	T	E	E	I	K	R	T	E
Template Known Secondary structure								S	S	S								.	.	.	.	.	.	.			S		S	S										T	T	T																T	T											T	T	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.								.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		167	.	.	170	.	.							.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure								.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.
Query Sequence		R	W	W	Q	Q	N	.	.	.	.	.	.	G	G	D	R	Q	L	I	H	S	E
Query Conservation								.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.
Template Conservation
Template Sequence		M	I	M	K	S	I	L	Q	S	T	H	N	L	K	N	S	S	I	I	P	I	S
Template Known Secondary structure											S	S	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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