Job Description P33030 Confidence 97.72% Date Thu Jan 5 11:51:08 GMT 2012 Rank 65 Aligned Residues 143 % Identity 13% Template c1s0uA_ PDB info PDB header:translation Chain: A: PDB Molecule:translation initiation factor 2 gamma subunit; PDBTitle: eif2gamma apo Resolution 2.40 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	T	G	F	L	G	S	G	K	T	T	S	I	L	H	L	L	A	H	K	D	P	N	E	K	W	A	V	L	V	N	E	F	G	E	V	G	I	D	G	A	L	L	A	D	S	G	A	L	L	K	E	I	P	G	G	C	M	C	C	V	N	G	L	P	M	Q	V	G	L	N	T	L	L	R	Q	G	K	P
Query Conservation
Alig confidence																												.	.	.	.									.	.																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.									.	.																										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	M	V	G	H	V	D	H	G	K	T	S	L	T	K	A	L	T	G	V	W	T	D	R	G	I	.	.	.	.	S	I	R	L	G	Y	A	D	.	.	C	E	I	R	K	C	P	Q	C	G	T	Y	T	T	K	P	R	C	P	N	C	L	A	E	T	.	.	.	.	.	.	.	.	.	.	.	E	F	L	R
Template Known Secondary structure					S		T	T	S	S										S								.	.	.	.									.	.							T	T	T					S	S	S	B		T	T	S			B		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.									.	.																										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.					.	.	.	70	.	.	.	.			.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.												100	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		D	R	L	L	I	E	P	T	G	L	G	H	P	K	Q	I	L	D	L	L	T	A	P	V	Y	E	P	W	I	D	L	R	A	T	L	C	I	L	D	P	R	L	L	L	D	E	K	S	A	S	N	E	N	F	R	D	Q	L	A	A	A	D	.	.	I	I	V	A	N	K	S	D	R	T	T	P	E	S	E	Q
Query Conservation																																																																.	.
Alig confidence																			.	.	.	.	.	.	.																																							.	.
Template Conservation																			.	.	.	.	.	.	.
Template Sequence		R	V	S	F	V	D	S	P	G	H	E	T	L	M	A	T	M	.	.	.	.	.	.	.	L	S	G	A	S	L	M	D	G	A	I	L	V	I	A	A	N	E	P	C	P	Q	P	Q	T	K	E	H	L	M	A	L	E	I	L	G	I	D	K	I	I	I	V	Q	N	K	I	D	L	V	D	E	K	Q	A	E
Template Known Secondary structure									S	S									.	.	.	.	.	.	.		T	T		S			S								T	T	S		S	S														T	T											T	T	S	S		T	T	T	T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.								.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		164	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	Q	R	W	W	Q	Q	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	N	Y	E	Q	I	K	E	F
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions