Return to main results Retrieve Phyre Job Id

Job DescriptionP25550
Confidence11.38%DateThu Jan 5 11:42:07 GMT 2012
Rank91Aligned Residues68
% Identity10%Templated1hvxa2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   179180.........190.........200.........210.........220..... ....230.........240......
Predicted Secondary structure 





















..

Query SS confidence 














































. .




















Query Sequence  QQPLQVYDFLCDAGVEFIQFIPVVERLADETTARDGLKLHAPGDIQG. . ELTEWSVRPEEFGEFLVAIFD
Query Conservation              

                                 ..                     
Alig confidence 














































..




















Template Conservation    
  





 


 






         

      
         

   

  

  

  

 
Template Sequence  TKVANEANNLSSLGITALWLPPAYKGTSRSDVGYGVYDLYDLGEFNQKGAVRTKYGTKAQYLQAIQAAHA
Template Known Secondary structure  TT




SSSTT

SSSTT
SS
S
BTTBSS
SS

Template Predicted Secondary structure 








































Template SS confidence 





































































   24.....30.........40.........50.........60.........70.........80.........90...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions