Return to main results Retrieve Phyre Job Id

Job DescriptionP25550
Confidence18.46%DateThu Jan 5 11:42:07 GMT 2012
Rank56Aligned Residues72
% Identity18%Templated1bf2a3
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  RTSAQQPLQVYDFLCDAGVEFIQFIPVVERLADET. . . . . . . . . . . . TARDGLKLHAPGDIQGELTEWSVRPEEFGEFLV
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Template Sequence  RGTYYGAGLKASYLASLGVTAVEFLPVQETQNDANDVVPNSDANQNYWGYMTENYFSPDRRYAYNKAAGGPTAEFQAMVQ
Template Known Secondary structure  TTSTT

S

B
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TTTTSSTT

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   201........210.........220.........230.........240.........250.........260.........270.........280
 
   243...
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Query Sequence  AIFD
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Template Sequence  AFHN
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   281...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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