Job Description P25550 Confidence 22.24% Date Thu Jan 5 11:42:07 GMT 2012 Rank 41 Aligned Residues 100 % Identity 18% Template c2dh3A_ PDB info PDB header:transport protein, signaling protein Chain: A: PDB Molecule:4f2 cell-surface antigen heavy chain; PDBTitle: crystal structure of human ed-4f2hc Resolution 2.80 Å

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		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.																			.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	G	R	P	T	H	K	L	V	M	R	A	L	T	L	L	Q	K	H	H	V	D	Y	N	V	L	V	C	V	N	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	A	Q	Q	P	L	Q	V	Y	D	F	L	C	D	A	G	V	E	F	I	Q	F	I	P	V	V	E	R	L	A
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	G	A	G	N	L	A	G	L	K	G	R	L	D	Y	L	S	S	L	K	V	K	G	L	V	L	G	P	I	H	K	N	Q	K	D	D	V	A	Q	T	D	L	L	Q	I	D	P	N	F	G	S	K	E	D	F	D	S	L	L	Q	S	A	K	K	K	S	I	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S			S					G	G	G						T	T	T														T	T		S	T	T								T	T	T																T	T		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	T	T	A	R	D	G	L	K	L	H	A	P	G	D	I	Q	G	E	L	T	E	W	S	V	R	P	E	E	F	G	E	F	L	V	A	I	F	D	H	W	I	K	R	D	V	G	K	I	F	V	M	N	I	E	W	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	R	V	I	L	D	L	T	P	N	Y	R	G	E	N	S	W	F	S	T	Q	V	D	T	V	A	T	K	V	K	D	A	L	E	F	W	L	Q	A	G	V	D	G	F	Q	V	R	D	I	E	N	L
Template Known Secondary structure		.	.	.	.	.	.	.								T	T	T	T	S	S	S	T	T	S	S	S			T																T	T									G	G	G	S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions