Job Description P25550 Confidence 20.25% Date Thu Jan 5 11:42:07 GMT 2012 Rank 45 Aligned Residues 71 % Identity 21% Template c2au3A_ PDB info PDB header:transferase Chain: A: PDB Molecule:dna primase; PDBTitle: crystal structure of the aquifex aeolicus primase (zinc binding and2 rna polymerase domains) Resolution 2.00 Å

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	I	S	N	S	F	Q	T	N	G	V	L	L	D	D	E	W	C	A	F	L	A	E	H	H	F	L	V	G	L	S	L	D	G	P	P	E	I	H	N	Q	Y	R	V	T	K	G	G	R	P	T	H	K	L	V	M	R	A	L	T	L	L	Q	K	H	H	V	D	Y	N	V	L	V	C	V	N	R	T	S
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	G	I	R	N	V	V	A	P	L	G	T	A	L	T	Q	N	Q	A	N	L	L	S	K	F	T	K	K	V	Y	I	L	Y	D	G	D	D	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	R	K	A	M	K	S	A	I	P	L	L	L	S	A	G	V	E	V	Y	P	V	Y	L	P	E	G	Y	D
Template Known Secondary structure		T	T			S					S	S	S	S											T	T		S								S	S				.	.	.	.	.	.	.	.	.	.	.	.	.														T	T										T	T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.														.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		178	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	Q	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	D	E	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions