Job Description P76017 Confidence 95.28% Date Thu Jan 5 12:17:29 GMT 2012 Rank 35 Aligned Residues 195 % Identity 12% Template d1phoa_ SCOP info Transmembrane beta-barrels Porins Porin Resolution 3.00

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		722	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	G	G	D	K	R	L	S	D	V	M	P	L	Y	V	G	L	Y	I	G	S	T	H	A	S	P	D	Y	S	G	G	D	G	T	A	R	S	D	Y	M	G	M	Y	A	S	Y	M	A	Q	N	G	F	Y	S	D	L	V	I	K	A	S	R	Q	K	N	S	F	H	V	L	D	S	Q	N	N	G	V	N	A
Query Conservation
Alig confidence																																																.																					.	.	.	.	.	.	.
Template Conservation																																																.																					.	.	.	.	.	.	.
Template Sequence		L	A	T	Y	R	N	T	D	F	F	G	V	I	D	G	L	N	L	T	L	Q	Y	Q	G	K	N	E	N	R	D	V	K	K	Q	N	G	D	G	F	G	T	S	L	T	Y	D	.	F	G	G	S	D	F	A	I	S	G	A	Y	T	N	S	D	R	T	N	E	.	.	.	.	.	.	.	Q	N	L	Q	S	R
Template Known Secondary structure									S	T	T	T	T		T	T											B		S	S		S	T	T		B		S										.		T	T	T	T														G	G	.	.	.	.	.	.	.	G	T	T	S	S	S
Template Predicted Secondary structure																																																.																					.	.	.	.	.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.								.	.	.	.	.	.
		802	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	T	A	N	G	M	S	I	S	L	E	A	G	Q	R	F	N	L	S	P	T	G	Y	G	F	Y	I	E	P	Q	T	Q	L	T	Y	S	H	Q	N	E	M	T	M	K	A	S	N	G	L	N	I	H	L	N	H	Y	E	S	L	L	G	R	A	S	M	I	L	G	Y	D	I	T	A	G	N	S	Q	L	N
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.																.
Template Conservation																						.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.																.
Template Sequence		G	T	G	K	R	A	E	A	W	A	T	G	L	K	Y	D	A	N	N	I	.	.	.	.	.	.	.	.	.	.	Y	L	A	T	F	Y	S	E	T	R	K	M	T	P	I	T	G	G	F	A	N	.	.	.	.	.	.	.	.	.	.	K	T	Q	N	F	E	A	V	A	Q	Y	Q	F	D	F	.	G	L	R
Template Known Secondary structure		S		S	S														T	T		.	.	.	.	.	.	.	.	.	.											S		S			S	S	S	S		S	.	.	.	.	.	.	.	.	.	.														S	S	.	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.																.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.											.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.											.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.
		882	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.							.	.	.	950	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.
Query Sequence		V	Y	V	K	T	G	A	I	R	E	F	S	G	D	T	E	Y	L	L	N	N	S	R	E	K	Y	S	F	K	G	N	G	W	N	N	G	V	G	V	S	A	Q	Y	N	K	Q	H	T	F	Y	L	E	A	D	Y	T	Q	G	N	L	F	D	Q	K	Q	.	.	.	.	.	.	V	N	G	G	Y	R	F	S	F
Query Conservation																																																																			.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.
Template Sequence		P	S	L	G	Y	V	L	S	K	G	.	.	.	.	.	.	.	.	.	.	K	D	I	E	G	I	G	D	E	D	L	V	N	Y	I	D	V	G	A	T	Y	Y	F	N	K	N	M	S	A	F	V	D	Y	K	I	N	Q	L	D	S	D	N	K	L	N	I	N	N	D	D	I	V	A	V	G	M	T	Y	Q	F
Template Known Secondary structure												.	.	.	.	.	.	.	.	.	.		S	B	T	T	T	B																S	S	S	S														S	S		T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280											.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions